| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3923 |
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| Symbol | |
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| ID | 6285103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 168140 |
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| End bp | 168913 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642618416 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001892457 |
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| Protein GI | 187926112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.839108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACGG AAGCCGTGCT CCTGCACCTG CGTTACCTGC TGATCGGACC GTATCCGAAT
GGTCCGCTGG CCGGGGCGGC GCTCACGTTG TGGATGGCGC TGTGGGCCTG CGTGATGGCC
ACGGCAGCGG GCGTCGGTTG TGCGCTGTTG CTGGACAGGC TCGACGCCAC GCCGGGCTTG
CGCCGGTTGG CGCGCCTGCT ACGCGGGCTG CTGGCCACGC TGCGGGCTAT CCCGGTACTC
ATGCTGATGT TCTGGGCGTA CTTTCTGATC CCCATGGCCC TGGGCGTGTC GGTGCCGGAA
ACCGCCACGG TGGTCGCTGC ACTTGCCGCC GTGGGCGCGG CCTACATCAC CCAAAGCATG
GAAGCCGGCT TGCGTGCCGT CGGTGCCGGG CAGCGCAATG CGGCACTGGC GCTGGGCATG
TCGCCCCCAC AGGCGCTGCT GACCGTGGTG CTGCCGCAGG CGTGGCGCAT CATGCTGCCG
TCACTCGCCA ACCAATGGGT ATCGACGGTC AAGGACACAT CGCTGGCGTA TATCGTGGGC
GTGGTGGAAC TGTCCACCGC CGCCAGCCAG GTCAACAGCC GCACGGTGGC CTACCCGGCC
GAGGTGTTCG GCGCGGTGGC CGTACTGTAT TTCCTGCTGT GCACCGGCAT CGAGGCCTTG
CCCAATTGGT TGCGCGCAGG CCCCCGCACG CCTGCGGCGC AACCGGACCA CATGTCGACC
TGGCAACGCT TTTTGCGCTG GCGCGAACGC CCTGTTTCAG ATGCCGTGAC TTGA
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| Protein sequence | MTTEAVLLHL RYLLIGPYPN GPLAGAALTL WMALWACVMA TAAGVGCALL LDRLDATPGL
RRLARLLRGL LATLRAIPVL MLMFWAYFLI PMALGVSVPE TATVVAALAA VGAAYITQSM
EAGLRAVGAG QRNAALALGM SPPQALLTVV LPQAWRIMLP SLANQWVSTV KDTSLAYIVG
VVELSTAASQ VNSRTVAYPA EVFGAVAVLY FLLCTGIEAL PNWLRAGPRT PAAQPDHMST
WQRFLRWRER PVSDAVT
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