Gene Rpic_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3915 
Symbol 
ID6285071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp159508 
End bp160515 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID642618408 
Productlipopolysaccharide-modifying protein 
Protein accessionYP_001892449 
Protein GI187926104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATC TCAAATACCG CTTGAGCAGA GTCTCTGCAA AAAAATTCTG GTATTACTTT 
TCGAATGCCT CTAACCATTT TCTCGCGCGT GCTACAAAAA ATGGAAAAGC TGAGACGCTT
CTGAAAAGAA AAAGTGGTCA GCGTCGTACG CAGGACGTCT TCGATCGATT GAGCTATTAC
AACTCAATTT CGGAGGCATT CGACACCAGT TGCAATGCCG TGGAATATTC AAATTTCTTG
TTGAAATCCT CAACAAGCAC CATCGTCGAC AAGCATTGTG AAATAGGGAG TACCTATTTC
TATGATCTGG TCGACCTGAT GGATTATTTT GGTCCGGGAT ACAGCTTTGA CTACGACTGC
GGGGATGTGA CTGTCGAGCC GAACCACCCG GCGTTCGTAA AAAGCCGCCC GATCAAGAAC
AGCTCCCATA ATGGCATTCT CTTGAAGCTC GACGCCATCC GGCATTTTTC GCTGGCACGC
GACCCCATCG ATTTCCAAGA CAAGAAGCCC ATGGCGGTCT TTCGGGGGCC GTGCCATCAG
GAACACCGCA GGGCGTTTGT GGAGCGATGT CATGACCTGG CAAACGTTAA CATCGGGGAT
ACTCGAAAAT CAGAACTTGG GAAAGCGACT TACAAATCGC CGATGACGAT TGCGGAGCAA
TTGCAATACA AATTTATTGT GAGTGTCGAG GGAAACGACG TTGCAACGAA TTTGAAATGG
ATCATGGCGT CCAATTCGCT GTGCTTCATG AGGCGGCCCC GGTATGAGAC GTGGTTCATG
GAAGGAAGGT TGATCCCGGA CGTGCATTAT GTCCTTCTGA AAGATGATTA TTCCGACCTC
CAGGAGAAAA TTGAGCATTA CCGGAAATAC CCTGGCGATG CATTGGCGAT CGTCCGCAAC
GCCAATCGGT GGGTGGCGCA ATTCATGAAC CGTGACCAGG AACGCCTGCT CGGTTTGATG
GTGATCGCAA AGTATTTCCG GTTGTCGGGC CAACAGTCGT TTTGGTAA
 
Protein sequence
MRHLKYRLSR VSAKKFWYYF SNASNHFLAR ATKNGKAETL LKRKSGQRRT QDVFDRLSYY 
NSISEAFDTS CNAVEYSNFL LKSSTSTIVD KHCEIGSTYF YDLVDLMDYF GPGYSFDYDC
GDVTVEPNHP AFVKSRPIKN SSHNGILLKL DAIRHFSLAR DPIDFQDKKP MAVFRGPCHQ
EHRRAFVERC HDLANVNIGD TRKSELGKAT YKSPMTIAEQ LQYKFIVSVE GNDVATNLKW
IMASNSLCFM RRPRYETWFM EGRLIPDVHY VLLKDDYSDL QEKIEHYRKY PGDALAIVRN
ANRWVAQFMN RDQERLLGLM VIAKYFRLSG QQSFW