| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3903 |
|---|
| Symbol | |
|---|
| ID | 6285039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 150693 |
|---|
| End bp | 151469 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618396 |
|---|
| Product | Ribosyldihydronicotinamide dehydrogenase (quinone) |
|---|
| Protein accession | YP_001892437 |
|---|
| Protein GI | 187926092 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.96153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCC TGATCGTCTA CGCCCATCCC GAACCCAAGT CGCTCAACGG CGCCCTCAAG
GACTTTGCCG TCCAGCGTCT GGAAGCCGCC GGCCACACCG TGCAGGTATC GGACTTGTAC
GCCATGCAAT GGAAGGCCGC GCTGGATGCA AGCGACAGCA CTGTTGGGCC GGTCGGTCCG
CATTTCCATC CGTCGCTCGA TTCCAAGCAC GCGTTCGAGA ACGGCCTGCA AGCCGATGAC
ATTGCTGCCG AACAAGCCAA GCTGCAATGG GCCGACGCCG TGATCCTGCA GTTTCCGCTG
TGGTGGTTTT CGATGCCGGC CATCCTGAAA GGCTGGGTCG AGCGCGTCTA TGCATACGGC
TTTGCCTATG GCGTTGGCGA GCATTCCGAC ACCCACTGGG GCGACCGCTA CGGCGAAGGC
ACGCTCGCCG GCAAACGTGC CATGCTGATC GTCACCACGG GTGGCTGGGA GTCGCACTAC
AGCCCGCGCG GCATCAACGG CCCGATCGAT GACATCCTGT TCCCGATCCA GCACGGCATC
CTGTACTACC CCGGCTTTGA GGTCGTGCCG CCGTTCGTGA GCTACCGCAC CGGCCGCATG
GACGACGCGC GCTTTGCGCA GACCACGCAG GCGCTGGGCC AGCGACTCGA CACCTTGTTC
ACCACCGCGC CGATCCCGTT CCGCCCGCAG AATGCAGGTG AATACGAGAT CCCGTCGCTC
ACGCTGCGTG CCGAGATCGC GCCTGAAAAA TCGGGCTTCG CTGCGCATCT CGCCTAG
|
|---|
| Protein sequence | MNVLIVYAHP EPKSLNGALK DFAVQRLEAA GHTVQVSDLY AMQWKAALDA SDSTVGPVGP
HFHPSLDSKH AFENGLQADD IAAEQAKLQW ADAVILQFPL WWFSMPAILK GWVERVYAYG
FAYGVGEHSD THWGDRYGEG TLAGKRAMLI VTTGGWESHY SPRGINGPID DILFPIQHGI
LYYPGFEVVP PFVSYRTGRM DDARFAQTTQ ALGQRLDTLF TTAPIPFRPQ NAGEYEIPSL
TLRAEIAPEK SGFAAHLA
|
|---|
| |