Gene Rpic_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3894 
Symbol 
ID6285896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp142862 
End bp143722 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID642618388 
Producthypothetical protein 
Protein accessionYP_001892429 
Protein GI187926084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.463258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT GGCTTGCGAC GATCGCCGGA TGGACGCTCT GCGCATGCGC AGCGTTCGGC 
AACGCCGCCC ATGCGGCCGA TGCGCCTGAT GACGGTGCGA CGCTGAGCGT CAACATCGGC
ACGGAGCACC GCACGCTGTC GCGCGATGCA TTGCTGCACG ATCCGCACCT GACCAGCGTG
ACCGTGGAAG ACCAGAACCT GAAGCACCGC CTGACCTTCA AGGCGATCCC GGTGACGGCG
CTGTTCCGCG GGCAGACTGT CAGCCCAGAG GCCAGCGCCA CCACCGCCGC CAGCGACGGC
TACGTATCGC ACCTGCCGAT GCGCTTGCTG CTGGGCGATC GCGCCGACGG GCCCCGCGCC
TGGCTGGCCG TGGAAGACCC CGCCGCACCG TGGCCGACGC TCAAGGGCCA GGACATCGGC
CCGTTCCGGC TGATCTGGAC GGCGCCGCCG GCCAAGGCGT CGGTGGTGAA CGAAAGCCTG
TGGACTTACA GCATCGTGCG TATCGACATT GCCGCGCTGC CCGGCGAGCG CTTTGCGGCC
ATCCGCCCGG CTGCGGGGTT GCCTGCAGAT GGCCCGGTCA TGCGCGGTTT CGCCACGTTC
CAGCGCGTCT GCTTCTCGTG CCACACGCTC AATCGCGCCG GCGATGCCAA CCTGGGCCCC
GATCTGAACG TGCCGTACAG CCCGGTGGAA TATCTGGGCG ACGAGAAACT GCGCCACCTG
ATCCGCGATC CGCAATCGCT GCGCTGGTGG CCCAACGCAC GCATGTCGGC CATCGACGAG
AAGACGCTTT CCGATGCGCA GCTCAACGAC CTGCTGGCGT ATTTTCACCA CATGACCAAG
CGCAAGTCGG CAGCGCAATG A
 
Protein sequence
MKNWLATIAG WTLCACAAFG NAAHAADAPD DGATLSVNIG TEHRTLSRDA LLHDPHLTSV 
TVEDQNLKHR LTFKAIPVTA LFRGQTVSPE ASATTAASDG YVSHLPMRLL LGDRADGPRA
WLAVEDPAAP WPTLKGQDIG PFRLIWTAPP AKASVVNESL WTYSIVRIDI AALPGERFAA
IRPAAGLPAD GPVMRGFATF QRVCFSCHTL NRAGDANLGP DLNVPYSPVE YLGDEKLRHL
IRDPQSLRWW PNARMSAIDE KTLSDAQLND LLAYFHHMTK RKSAAQ