Gene Rpic_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3886 
Symbol 
ID6285014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp138017 
End bp138508 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID642618382 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_001892423 
Protein GI187926078 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.321119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGG TCAAACGTAC GAGCCACGCG GATTCTCTTT GCGGCGTCGC CAGGCCACTG 
GACGCCATTG GCGACGGGTG GTCGCTGCTG ATCGTTCGCG ATGCGTTTGA CGGCCTGCGC
CGCTTTGGTG AGTTTCAGCG CAGTCTCGGA CTGTCGAAGA ACATCCTGGC GGTGCGCCTG
CGCAACCTGG TTGCGCACGA CATTCTCGAG ACGGTGCCGG CGTCCGACGG CAGCGCGTAT
CAGGACTACG TGCTGACCGA GAAAGGGCGC GCGCTGTTTC CGCTGCTGGT GGCGCTGCGG
CAGTGGGGTG AAGCGTTCTG CTTTGCGCCG GATGAGGCGC ACGTTGTACT CGTCGACAAG
GCAACGGGTA AGCCGGTGCC TCGCCTTGAA CTCCGTGCGC AGGACGGGCG CGCGCTGGCA
CCGGAGGATA CGGTGGTCGT CCACCCATCG GCCATCAGGC CGACGAAGCG CCAGCGGGCG
AAGGCGAGCT GA
 
Protein sequence
MQMVKRTSHA DSLCGVARPL DAIGDGWSLL IVRDAFDGLR RFGEFQRSLG LSKNILAVRL 
RNLVAHDILE TVPASDGSAY QDYVLTEKGR ALFPLLVALR QWGEAFCFAP DEAHVVLVDK
ATGKPVPRLE LRAQDGRALA PEDTVVVHPS AIRPTKRQRA KAS