Gene Rpic_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3885 
Symbol 
ID6285013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp136993 
End bp137907 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID642618381 
Productalpha/beta hydrolase fold 
Protein accessionYP_001892422 
Protein GI187926077 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.345695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.363483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTG ATACGTTCGA TGGGATGTAC CCCTATGCAC CTCGCTTTAC CGATGCACCG 
GGCTTTCCGA TGCATTACGT GGACGAGGGC CCCGCCGATG GCGAAGTCGT CCTGTGCCTG
CATGGCGAGC CCACGTGGGG TTTCCTCTTC CGGCACCTGA TCGCGGTGCT GCGCGGCACC
CACCGCATGG TGGTGCCCGA CCACATGGGC TTCGGCAAGA GCGGAACGCC GCCATCACGC
AGCTACTGGC TGCAAGACCA CATCGACAAC CTCGAGCGCT TCGTGCTCGC GCTGGACCTG
CGCGATATCA CCCTCGTCAT GCACGACTTT GGCGGCCCGG TCGGCATGGG CCTCGCGTCA
CGTCATCCGG ATCGCGTGCG GCGCATTGTG AGCGTCAATG GGCCGACGCC GTTCGGGCAG
GCGACGCTGG GTGAACGTCT GGCCGCCAAT GCGGCGGTAT CGCCGTGGTT TCAGTGGATC
GTGCGGGCGG AATCGGAGGG GCGCATTGAA GCCGTGCTGG GTGAACTTGG CTTCAATATC
CTCAGTACCC TGAAGCTCAA TGGCTTTGAA GACCACCGGC TCATCAACGA TGCGTGGTTG
CAGGCGTACG GCGCGCGCTT TGCGACGCCA GCAGACTGCG TGGGTGCCAT CGGCTGGGCC
AAAGGCTTTG CTACCGGCGC GCATCGTTTT GAACTGCCGG ACGCTGCAGC GCGCCGTGCC
ATTGTCACCA AACCCGCCAT GGCGATCTGG GGCATGGCCG ATCGCACGTT GCATGCGGAA
CATTTCCTGC CGCTGTTCAG CGAGCTGTTT CCGGATGCAC CGGTGCATCG GTTGCCTGGC
GTTGGACATT ACAGCCTGGA AGATGCACCC GATGCGATTG CCGATCGCAT CGCTACGTTT
CTCGGGCAAA CGTGA
 
Protein sequence
MRTDTFDGMY PYAPRFTDAP GFPMHYVDEG PADGEVVLCL HGEPTWGFLF RHLIAVLRGT 
HRMVVPDHMG FGKSGTPPSR SYWLQDHIDN LERFVLALDL RDITLVMHDF GGPVGMGLAS
RHPDRVRRIV SVNGPTPFGQ ATLGERLAAN AAVSPWFQWI VRAESEGRIE AVLGELGFNI
LSTLKLNGFE DHRLINDAWL QAYGARFATP ADCVGAIGWA KGFATGAHRF ELPDAAARRA
IVTKPAMAIW GMADRTLHAE HFLPLFSELF PDAPVHRLPG VGHYSLEDAP DAIADRIATF
LGQT