Gene Rpic_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3884 
Symbol 
ID6285012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp136065 
End bp136883 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID642618380 
Productenoyl-CoA hydratase 
Protein accessionYP_001892421 
Protein GI187926076 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.192414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.482793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTC ATTCCACCAC TGCCGCCACG GCAACCCCCG CCACGAACGA CGCACTGGTT 
CTGCGCGACG ACCACGACGG CGTCGTCACC CTGCGGCTGA ATCGGCCCCT GCAGTTCAAC
GCGTTGTCTG AAGCCATGCT CGATGCGCTG CAGCGCGTGT TGGACGACAT TGCACAAGAT
GCGACGGTGC GCTGCGTGGT GCTTGGCGCC GAGGGCAAGG CGTTCTGCGC CGGGCACGAC
CTGCGTGAAA TGCGCGGCAC GCCGGAGCTT GCGTATTACC GGGCGCTGTT TGCGCGCTGC
AGCGTGGTAA TGCAGGCCAT TCAGGCGCTG CCGGTGCCGG TCATTGCGCG CGTGCATGGC
GTGGCAACGG CGGCGGGTTG CCAGTTGGTC GGCAGTTGCG ATCTGGCCAT TGCCTCGGAT
GCGGCGCGGT TTGCGGTGTC GGGCATCAAC GTCGGGCTGT TCTGCTCGAC GCCGGCGGTG
GCGTTATCGC GCAACGTGCT CGCCAAGCGC GCGTTCGACA TGCTGGTGAC TGGGCGCTTT
ATCGATGCGG CCACGGCGGC CGACTGGGGC CTGATCAACG AGGCTGTGCC GGCGGCGGAC
CTGGATGACG CGGTTGCCCG CAAGGTGGCG GACATCGTGT CGAAGAGCCC CACCGCCATC
CGCTATGGCA AGGCGATGTT CTACCGGCAA CGGCAGATGC CGCTTGCCGA TGCCTATGCT
TACGCAGGCG ATGTCATGGC CCGCAACATG ATGGATGAAG ACGCCGGCGA GGGCATCGAT
GCCTTCCTGG AAAAACGCCC CGCCCGCTGG CGCTCGTAG
 
Protein sequence
MQPHSTTAAT ATPATNDALV LRDDHDGVVT LRLNRPLQFN ALSEAMLDAL QRVLDDIAQD 
ATVRCVVLGA EGKAFCAGHD LREMRGTPEL AYYRALFARC SVVMQAIQAL PVPVIARVHG
VATAAGCQLV GSCDLAIASD AARFAVSGIN VGLFCSTPAV ALSRNVLAKR AFDMLVTGRF
IDAATAADWG LINEAVPAAD LDDAVARKVA DIVSKSPTAI RYGKAMFYRQ RQMPLADAYA
YAGDVMARNM MDEDAGEGID AFLEKRPARW RS