Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3882 |
Symbol | |
ID | 6285009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 133925 |
End bp | 134842 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618378 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_001892419 |
Protein GI | 187926074 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.412481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCATA CCACCACGCC CGCATCCAGC CACGTCACTG ATCTGGCCCT GCTGCTCACG CTGTCGACCT TGTGGGGCGC GTCGTACACG TTCATTCGGG TGGGCGTGGA GACCATTCCG CCGCTCACCT TCATCGCCGC CAGAACGTTG ATCGCGGCGA CGCTGCTGTT GGCGTGGATG CGCAGCCGCA ATATCCGCAT GCCCCGAGAC AGGCAGGTCT GGATGCGCTT CGGCGTGCAG TCGCTGCTCA ACAGCGTCGT GCCGTTCACG CTCATCGCCT GGGCCGAGCG CTCGGTTGGC GCGAGTCTGG CGACCGTCCT GAATTCGACG TCGCCCGTGA TGGTGTTTGT GGCCACGGCG TTCGTTACGC GGCACGAATC GGTGTCGTTG CGCAAGCTGG TCGGCGTGAT TGCCGGGTTT GTCGGCACGT GTTTTGTGAT TGGGCCGAGC GCGTTCGATG GGCTGGGAGG CCAGCTCGTT GCGCAACTGG CCATCCTGGC GGCCACGGCG TGCTATGCAG GCGCGGCCAT CTACGGCCGG TCGTTCAAGG GGCTGCACCC TGCGGCGCCT GCTACCGGTT CGTTGCTGAT GGGCGCGTTG GTGCTGACGC CCACCAGTCT GCTTGTGGAT CATCCTTGGG CACTTCAGCC TTCTGCGCGT TCGCTGATGG CGTTGGTGGC GCTGGCGGTG TTCTCTACGG CCCTCGCGTT TGCCATTTAC TTCCGGCTCA TTCAAACGCT CGGCGCGATC GGTACGACTG CGCAGGCCTA TCTGCGCGTG CCGATCGGGG TAGCGATCGG CGTGGTGTTT CTGGGGGAAT CGTTGCCGCC TTCAGCGTGG ATCGGGCTGG CGTGTGTGGT GGTGGGGGTG GCGGCAATGT CGATGCCGGC GCGGGCCACG CAAGTGCTGC GGGCGTAG
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Protein sequence | MPHTTTPASS HVTDLALLLT LSTLWGASYT FIRVGVETIP PLTFIAARTL IAATLLLAWM RSRNIRMPRD RQVWMRFGVQ SLLNSVVPFT LIAWAERSVG ASLATVLNST SPVMVFVATA FVTRHESVSL RKLVGVIAGF VGTCFVIGPS AFDGLGGQLV AQLAILAATA CYAGAAIYGR SFKGLHPAAP ATGSLLMGAL VLTPTSLLVD HPWALQPSAR SLMALVALAV FSTALAFAIY FRLIQTLGAI GTTAQAYLRV PIGVAIGVVF LGESLPPSAW IGLACVVVGV AAMSMPARAT QVLRA
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