| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3863 |
|---|
| Symbol | |
|---|
| ID | 6284966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 116177 |
|---|
| End bp | 116872 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618363 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001892404 |
|---|
| Protein GI | 187926059 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.529266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.383741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAC AAAGCCGCCC CCACATCATT CTCGCCAGCC TCACGCTTGC CGGCGGGTCG
CGCTATCCGT CTGCCCTGGG CCATCTCGTC CGGACGGCCG CTGTTGCGGC GTATCTGGCA
AACGTTTTGG AGCTGGACGA CGCGGAACAG CGGCACATCT ATCTTGTGGC GCCCGTGCAC
GACATCGGCA AGCTTGGCAT TCCGGATGAC GTCCTGCTCA AGCCCGCCGC CCTGACCGAC
GCAGAGCACG AGATCATGCA ACGGCACTCC AACATCGGTG CCGACCTGCT TGCAGGGACG
GCCGACCCGA TCCTGCAGTT GGCAGCCAGC GTCGCGCGCC ATCATCACGA GCATTTCGAC
GGCAGCGGCT ATCCGGCCGG CCTCGCGGGG GAAGACGTCC CGCTTGCCGC GCGCATCGTG
GCCGTTGCCG ATGCGTTTGA CGCCATGCTG GAGCCGCGCG TTTACCGCGA AGGGATGTCG
GAGGATGACG CGGTCGGTGC GGTGGCAGAC CAGAGTGGCC GGTACTTTGA CCCCACGCTG
GTGGAATGCT TCCTGAAGAA CGTGCTGGGG GTTCGGCGCG CTCGTGCTGC TGCAGAAAGC
CTGGTGCAGC AGTACGGCGA CGTGTCGGGC GTCATCCGGT TCTATGGAGC TCGAGACCAA
TCGCCGGCAT TCCTGAGGTA TATCCAAACG CTTTGA
|
|---|
| Protein sequence | MAQQSRPHII LASLTLAGGS RYPSALGHLV RTAAVAAYLA NVLELDDAEQ RHIYLVAPVH
DIGKLGIPDD VLLKPAALTD AEHEIMQRHS NIGADLLAGT ADPILQLAAS VARHHHEHFD
GSGYPAGLAG EDVPLAARIV AVADAFDAML EPRVYREGMS EDDAVGAVAD QSGRYFDPTL
VECFLKNVLG VRRARAAAES LVQQYGDVSG VIRFYGARDQ SPAFLRYIQT L
|
|---|
| |