| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3858 |
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| Symbol | |
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| ID | 6284961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 107724 |
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| End bp | 108911 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642618358 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001892399 |
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| Protein GI | 187926054 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.502527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CCGCGCAAGT GAAGATTCCC GCCACGTACA TGCGTGGCGG CACCAGCAAG
GGCGTGTTCT TCCGTCTGCA AGACCTGCCG CCGGCAGCAC AGCAGCCCGG CGCTGCTCGC
GACGCCTTGC TCATGCGCGT GATCGGCAGC CCCGACCCAT ACGGCAAGCA GATCGACGGC
ATGGGCGGCG CCACGTCGAG CACCAGCAAG ACGGTGATCC TCAGCAAGAG CACGCGCCCG
GACCACGACG TGGATTACCT GTTCGGCCAG GTCTCCATCG ACAAGCCGTT TGTGGACTGG
TCGGGCAACT GCGGCAACCT CTCCGCAGCG GTCGGCCCCT TTGCCATCAG TAACGGCCTG
GTCGATGCGA GCCGTGTACC GCAGAACGGC ACCGCCATCG TGCGCATCTG GCAGGCCAAC
ATCGGCAAGA CCATCATTGC GCACGTGCCC ATCACCAACG GCGCGGTGCA GGAGACGGGC
GACTTTGAGC TGGACGGCGT GACCTTCCCG GCGGCGGAAG TGCAGCTCGA ATTCCTCGAC
CCCGCAGCCG AGGAAGACGG TGACGGCGGC GGCGCGATGT TCCCCACCGG CAACCTCGTC
GACGACCTGG ACGTGCCCGG CGTGGGCACG CTCAAGGCGA CGATGATCAA CGCGGGCATC
CCGACGATCT TCATCAACGC AGAGGCCATC GGCTACACCG GCACCGAGCT GCAGGACGCC
ATCAACGGCG ATGCGAAGGC GCTGGCGATG TTCGAGACCA TCCGCGCGCA CGGCGCGGTG
CGCATGGGGC TGATCAAGAG CATCGATGAA GCCGCCACGC GGCAGCACAC GCCGAAGGTG
GCGTTTGTCG CACCGCCGAA GGACTACGTG GCGTCGAGCG GCAAGCAGGT CGGCGCGGGC
GATGTGGACT TGCTGGTGCG CGCGCTGTCG ATGGGCAAGC TGCACCACGC GATGATGGGC
ACGGCGGCGG TGGCCATTGG TACGGCAGCG GCCATTCCTG GCACGCTGGT CAACCTGGCG
GCCGGCGGCG GAGAACGTGG TGCGGTGCGC TTCGGGCATC CGTCGGGCAC GCTGCGCGTG
GGCGCGGAGG CCAAGCTGGT GGACGGCGAA TGGACGGTCA CCAAGGCCAT CATGAGCCGC
AGCGCACGCG TGTTGATGGA AGGCTGGGTG CGCGTGCCGG GCGCCTGA
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| Protein sequence | MSHPAQVKIP ATYMRGGTSK GVFFRLQDLP PAAQQPGAAR DALLMRVIGS PDPYGKQIDG
MGGATSSTSK TVILSKSTRP DHDVDYLFGQ VSIDKPFVDW SGNCGNLSAA VGPFAISNGL
VDASRVPQNG TAIVRIWQAN IGKTIIAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFLD
PAAEEDGDGG GAMFPTGNLV DDLDVPGVGT LKATMINAGI PTIFINAEAI GYTGTELQDA
INGDAKALAM FETIRAHGAV RMGLIKSIDE AATRQHTPKV AFVAPPKDYV ASSGKQVGAG
DVDLLVRALS MGKLHHAMMG TAAVAIGTAA AIPGTLVNLA AGGGERGAVR FGHPSGTLRV
GAEAKLVDGE WTVTKAIMSR SARVLMEGWV RVPGA
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