| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3848 |
|---|
| Symbol | |
|---|
| ID | 6284948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 96670 |
|---|
| End bp | 97248 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642618348 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001892389 |
|---|
| Protein GI | 187926044 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000121275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.760581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACA CCATCCACCG CTACCCCGCC GAATGGATCG ACCGCTGGAC CATGCATGAC
GGCTCCGTCG CCACCGTGCG CCCGATTTTG CCGCAAGACG CGCCGCTGGA GGCCGCGCTG
GTAGAGGGAT TGTCGTCTGA GTCCCGCTAT GCGCGCTTCC TGGTCGGCGG CGGACGGCTC
TCCGACGAGA TGCTGAGCGC CTACACCCAG ATCGATTACG TCAGCCATAT GGCGCTCGTG
GTCAGCGTCG CCCGGCCAGA CGGCACGGGC GAGGACCTGA TCGCAGATGG CCGGTTCGTC
ATCGAAGACG GCGTGGCCGA ATTCGCCATG CTGGTGGCCG ATGCCTGGCA GGGCAAGGGC
GTCGGCCGGC GCCTGTTTGC CACGCTGGTG CGCGCGGCCC GGGTGTCGGG CGCCCGAGAG
GTCTTCGGCG AAGTGCTGGC CACGAATCGC CGCATGATCG GACTGGCCCG CGATGCGGGT
TTCCGGCTTG CCAATGTGCC TGGCGATGCA ACCGTTTGCA CCGTGCGGCT ACCGCTGGCG
CAGGCGGAAG CCGCCGTGAC GCCGTTCGTC TTCGTCTGA
|
|---|
| Protein sequence | MLYTIHRYPA EWIDRWTMHD GSVATVRPIL PQDAPLEAAL VEGLSSESRY ARFLVGGGRL
SDEMLSAYTQ IDYVSHMALV VSVARPDGTG EDLIADGRFV IEDGVAEFAM LVADAWQGKG
VGRRLFATLV RAARVSGARE VFGEVLATNR RMIGLARDAG FRLANVPGDA TVCTVRLPLA
QAEAAVTPFV FV
|
|---|
| |