Gene Rpic_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3847 
Symbol 
ID6284947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp95985 
End bp96536 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID642618347 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_001892388 
Protein GI187926043 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000228408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.91917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAC CCGAGACTCT CTCCACCACG CCGGCGTCCG ACCTGGTGCC GTCGATGGAT 
CCGCCCTGTT CCATCGCGGC CGCGGTGTCG ATCGTCGGTG AGAAATGGAC GCTGCTGGTG
TTGCGCGAAG CGTTTTCGGG CGTTACGCGT TTCGATGAGT TCCTGCGCCG CACGGGGTGC
TCGTCGGCGA TCCTGTCGTC GCGGCTCAAG GCGCTGGTGA CGTACGGCAT CCTGCGCCGC
GTGCCTTACC AGGAGCCGGG CGACCGCGTA CGCGACGCGT ACAAGCTGAC GCGCGCGGGC
GTCGATCTGT TGCCCGCCAT CGTGGCGCTG ATGCAGTGGG GCGACCGGTA TCTCACGCCC
GACGGTGAAG GCCCGATCCT GCTGCGCGAT CGCGAGAGCG GCACGCCGAT TCACGTGGCG
CTGGTCAATG CATTGGGCGA GCCGGTCGCG CCCAAGAATT CGATGCGCGA GCCGAACCCG
CGTTATGGTC ACGGCAACGA CCCGGCATCC ACGGCACCCG CCCCCGCAGA CACGTCTGCG
GCCGACGAAT AA
 
Protein sequence
MKTPETLSTT PASDLVPSMD PPCSIAAAVS IVGEKWTLLV LREAFSGVTR FDEFLRRTGC 
SSAILSSRLK ALVTYGILRR VPYQEPGDRV RDAYKLTRAG VDLLPAIVAL MQWGDRYLTP
DGEGPILLRD RESGTPIHVA LVNALGEPVA PKNSMREPNP RYGHGNDPAS TAPAPADTSA
ADE