Gene Rpic_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3846 
Symbol 
ID6284944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp94984 
End bp95820 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID642618346 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001892387 
Protein GI187926042 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00362277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.959313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATG CCGTGGTACC GCTTTACCAC CAGATTTACG TCGTCCTGCG CCAGCAGATT 
CTCGAAGGCA AGTTCGGGGA TGGGCCGATG CCGGGCGAGA TCGAGCTCGC CCGCCAATTC
GGTGCGTCGC GCGTCACGAT GCGGCGCGTG TTCGATTACC TCGTCAAGGA AGGGCTGGTG
CGCCGGCATC GGGGCATGGG CACCTTCGTG GTCAAGCCCG ATGATCCGGC GGCGCAGGGT
AGCGCTGGCC AGACGCTGCT GCAGAACATC ATCGACGTGG GCGAGCGCAC CTCCGCCGTG
GTGGTCGAGT TCGAAGATGT GCTGGCGCCG CCCGACGAGG CCAAATGCCT CGAGGTGGCG
CCCGGCACGC CAGTCAAGAA GCTCGTGCGC GTGCGCCACC TGGAAGACAC GCCCATGGCG
CTCATCACCA CGTGGCTGCC GCTGGACGTC ACCAGCAAGC TCACGCTCGA TCGGCTGGCA
AACCAGTCGC TGCTGCGGCT GATCGAGGGC TCGGGCGTGC GCATCGACCG CGCGTCGCAA
GTGGTCTCGG CCCGCCTGGC GGATGTGGCG ACTGCGCAGT ACCTGGATGT GGCAGTGGGC
GCGCCGCTGC TTTCCGTGCA ACGGATCGTG CGTGAGATGA GCGGGCGCCC CGTTCAACTG
CTGCAGGGCC TGTACCGGCC TGACCGTTAC GAATACCGCA TGGAGCTCTC GCGTGTTGGG
GAGGACCGTG CCCGCCTGTG GATCGACAAC GCAGGCCACG ATGTGCTGGG CGGCCACAGC
GAGGACGTGG AAGACGTGCC AACGCCCGCC GCGGCGGGCC GCATCGAGCA CAGCTGA
 
Protein sequence
MPDAVVPLYH QIYVVLRQQI LEGKFGDGPM PGEIELARQF GASRVTMRRV FDYLVKEGLV 
RRHRGMGTFV VKPDDPAAQG SAGQTLLQNI IDVGERTSAV VVEFEDVLAP PDEAKCLEVA
PGTPVKKLVR VRHLEDTPMA LITTWLPLDV TSKLTLDRLA NQSLLRLIEG SGVRIDRASQ
VVSARLADVA TAQYLDVAVG APLLSVQRIV REMSGRPVQL LQGLYRPDRY EYRMELSRVG
EDRARLWIDN AGHDVLGGHS EDVEDVPTPA AAGRIEHS