Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3846 |
Symbol | |
ID | 6284944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 94984 |
End bp | 95820 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618346 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001892387 |
Protein GI | 187926042 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00362277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.959313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATG CCGTGGTACC GCTTTACCAC CAGATTTACG TCGTCCTGCG CCAGCAGATT CTCGAAGGCA AGTTCGGGGA TGGGCCGATG CCGGGCGAGA TCGAGCTCGC CCGCCAATTC GGTGCGTCGC GCGTCACGAT GCGGCGCGTG TTCGATTACC TCGTCAAGGA AGGGCTGGTG CGCCGGCATC GGGGCATGGG CACCTTCGTG GTCAAGCCCG ATGATCCGGC GGCGCAGGGT AGCGCTGGCC AGACGCTGCT GCAGAACATC ATCGACGTGG GCGAGCGCAC CTCCGCCGTG GTGGTCGAGT TCGAAGATGT GCTGGCGCCG CCCGACGAGG CCAAATGCCT CGAGGTGGCG CCCGGCACGC CAGTCAAGAA GCTCGTGCGC GTGCGCCACC TGGAAGACAC GCCCATGGCG CTCATCACCA CGTGGCTGCC GCTGGACGTC ACCAGCAAGC TCACGCTCGA TCGGCTGGCA AACCAGTCGC TGCTGCGGCT GATCGAGGGC TCGGGCGTGC GCATCGACCG CGCGTCGCAA GTGGTCTCGG CCCGCCTGGC GGATGTGGCG ACTGCGCAGT ACCTGGATGT GGCAGTGGGC GCGCCGCTGC TTTCCGTGCA ACGGATCGTG CGTGAGATGA GCGGGCGCCC CGTTCAACTG CTGCAGGGCC TGTACCGGCC TGACCGTTAC GAATACCGCA TGGAGCTCTC GCGTGTTGGG GAGGACCGTG CCCGCCTGTG GATCGACAAC GCAGGCCACG ATGTGCTGGG CGGCCACAGC GAGGACGTGG AAGACGTGCC AACGCCCGCC GCGGCGGGCC GCATCGAGCA CAGCTGA
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Protein sequence | MPDAVVPLYH QIYVVLRQQI LEGKFGDGPM PGEIELARQF GASRVTMRRV FDYLVKEGLV RRHRGMGTFV VKPDDPAAQG SAGQTLLQNI IDVGERTSAV VVEFEDVLAP PDEAKCLEVA PGTPVKKLVR VRHLEDTPMA LITTWLPLDV TSKLTLDRLA NQSLLRLIEG SGVRIDRASQ VVSARLADVA TAQYLDVAVG APLLSVQRIV REMSGRPVQL LQGLYRPDRY EYRMELSRVG EDRARLWIDN AGHDVLGGHS EDVEDVPTPA AAGRIEHS
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