Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3843 |
Symbol | |
ID | 6284939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 90335 |
End bp | 91618 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618343 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001892384 |
Protein GI | 187926039 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.558641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.945308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCAGA AACGCCCCAT GATCGCTTTG ATTGCATTGC TGTTCATCCA TACGCTGGCG CATATCGATC GCAACATGCT GCTGGGTTTT TCGTCGCAGG TGATTGCCGA TCTTGGCCTG AGCAATGCGC AATACGGTTT CCTGGTGGGG GCCGTCTGGG TATTGAGCTT TGGGGTGATG GCCGTCTTCC TCGGTACGCT GGCGGATCGC TTCAGCCGCA CACGCGTCAT TGCGGGCGGG TTGCTGGTCT GGAGCGCTTG CACGGCGGCA TCCGGTTTTG CGCAGAACTT CGAGCAAATG GCGGCGGCCC GCTTCCTGGT CTCCAGCGGA GAGGCTGCGC TGGTACCCGC GGCAGTGGCG ATGCTGGGCG AGTTGTTCCC AGAGAAGCAG CGTGGCACCG CGATCGGGCT GTTCTTCATG GGCATCCCGG CCGGCATCGG TTTCAGCTTC CTGCTGGCGG GCACCTTTGG GGCCGCGCAT GGATGGCGCT CGACATTTCA GGTGCTCGGC GTTGTGGGCG TGCTGATCGC TGTATCGCTC GCCTGCGTGC AGGAAGCGCC CTGGAATGTC GGCACGCAAC AGCGTGGTGC GCCTGTCTTG GCCCAGATAC GCGGCGCGCT GCGCGTGCTG GGCGCCAATC CGACCTTGCT GGCGGTGACG GTCGGTTTTG TTCTGGTGCA CATGGTGTTT GCCGGCCTGT CATTTACGCA GTTGTGGCTG GTGCGCGAGC GTGGACTCGA CGCCGCCACC ATCGCGCGGA CCATCGGCGC GCTGCAGCTG ATTGTCGGCA CCCTGGGGTC GGTCGCGGGC GGCATGGTGG GGGATCGCCT CGCCAGGCGC ATGCCTGGCG GACATGTGGG TTTCATGGTG CTGCTGGTCG CCATCTGCGG CCCGTTGATG ATCGCTTATC GCTTCGCGCC CCCCGGTTCG GCCCTGTTCT ACGTGGGCAT GTGCGCTGGC TTCTTCCTGC CGTTGGCACT GTATGGCCCG ACCAATACGG TCATCCTGAG CCAGGTGCCG GTGCATATGC GCGCGACCAT TTCCGGCTTC AGCATGCTGC TGATCAACGT GTTCGCCATT ACGCTTGGCA ATCTCGCCGT CGGTCTGCTC AGCGATCGGC TTGCCCGAAC GGGAGCCTCG GCGCCGCTGA CCTTCGTCCT GTTGGGGACG GACGTGCTGG CAGTCATGTC GGGCATGTGC TTCCTGGTGG CGGCGCGTGT TGGACTTCGC ACCAATGCGG CGTTGGGGCC GGCCTGTCCT GTGGCATCCC AGCTCCACGG CTGA
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Protein sequence | MFQKRPMIAL IALLFIHTLA HIDRNMLLGF SSQVIADLGL SNAQYGFLVG AVWVLSFGVM AVFLGTLADR FSRTRVIAGG LLVWSACTAA SGFAQNFEQM AAARFLVSSG EAALVPAAVA MLGELFPEKQ RGTAIGLFFM GIPAGIGFSF LLAGTFGAAH GWRSTFQVLG VVGVLIAVSL ACVQEAPWNV GTQQRGAPVL AQIRGALRVL GANPTLLAVT VGFVLVHMVF AGLSFTQLWL VRERGLDAAT IARTIGALQL IVGTLGSVAG GMVGDRLARR MPGGHVGFMV LLVAICGPLM IAYRFAPPGS ALFYVGMCAG FFLPLALYGP TNTVILSQVP VHMRATISGF SMLLINVFAI TLGNLAVGLL SDRLARTGAS APLTFVLLGT DVLAVMSGMC FLVAARVGLR TNAALGPACP VASQLHG
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