Gene Rpic_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3841 
Symbol 
ID6284937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp88231 
End bp89280 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID642618341 
Productprotein of unknown function DUF849 
Protein accessionYP_001892382 
Protein GI187926037 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.839397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.890512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCT TTGACGATTC GATGCTGCCC GAGAACCAGG AGCCATTGGT GATTCAGGTG 
GCGCCGTTCG GGCCGCAATT CCTTCCCAGC GACTCCGACG ACATCGCCGT CTCGATGGAC
GCGCAAATCC AGAAAGCGGT GGATTGCTAC AACGCCGGCG CGACCGTGCT GCACGTGCAC
GTGCGCGAGG AAGACGGCAA GGGCAGCAAG CGTCTGTCGA AGTTCAACGA AATGCTGACG
CGCCTGCGCG AAGCCGTGCC GAACATGGTG CTGCAGGTGG GGGGCTCGAT CTCATTCGCG
CCGGAAGACG AGGGCGCTGC GGCCAAATGG CTCAGCGATG ACACGCGCCA CATGCTGGCC
GAGCTGTCGC CGAGGCCCGA CCAGGTGACG ATTGCCATCA ACACCAACCA GATGAATGTG
ACCGAGCTGC TGACGCACGA CGATTGCGCC GGCACCTCGA TGGCCGAGCC CGCCTATTTC
CAGGCCTACA AGGAGATGTG GATTCCGTCG GGTCCGACCT TTGTCGAGGA GCACCTCAAG
CGACTGCAGG CGAGCGGCAT CCAGCCGCAC TTCATGCTGG CCGATGTAGG GCAGCTCGAG
ACCGTCGAGC GCCTGATCCG CCGCGGTCAC TACACCGGCC CCGTCGTGCT GAACTGGGTC
GCCATCGGCG GCGGCGCGGA CGGCCCCAAC CCGCGCAACA TGATGGAGTT CATCAACCGC
TGTCCGCAAG GTGCGGTGCT CACGATCGAA AGCCTGATGC GCCACGTGCT GCCGCTCAAT
ACCATGGCCA TCGCCATGGG CCTGCATGTA CGCGTTGGCA TCGAGGACAA CCTGTGGGGC
AAGAAGGGCG AACGCATGAC GTCGGTGCAG CAGGTCGAAC AGATGGTGCG CATCGCACGC
GAACTGCATC GCGATGTGGC GAGCGGCACG GACGCCCGCC GCATCTACAA GATCGGCGAG
CACTACAACG GCATCGACGA GACGCTTGCG GCCGTGGGTT ATGAGCCCAA TCGCAAGCCG
GGGCAGCGCG GCTTCCAACT GGCCGCCTGA
 
Protein sequence
MQFFDDSMLP ENQEPLVIQV APFGPQFLPS DSDDIAVSMD AQIQKAVDCY NAGATVLHVH 
VREEDGKGSK RLSKFNEMLT RLREAVPNMV LQVGGSISFA PEDEGAAAKW LSDDTRHMLA
ELSPRPDQVT IAINTNQMNV TELLTHDDCA GTSMAEPAYF QAYKEMWIPS GPTFVEEHLK
RLQASGIQPH FMLADVGQLE TVERLIRRGH YTGPVVLNWV AIGGGADGPN PRNMMEFINR
CPQGAVLTIE SLMRHVLPLN TMAIAMGLHV RVGIEDNLWG KKGERMTSVQ QVEQMVRIAR
ELHRDVASGT DARRIYKIGE HYNGIDETLA AVGYEPNRKP GQRGFQLAA