Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3839 |
Symbol | |
ID | 6284935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 86584 |
End bp | 87660 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618339 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001892380 |
Protein GI | 187926035 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.565712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.744721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTACC TTGTCCGCAG CGCCAGCCTG ACCGGATACG CCGAAGCCGC CCGCGCGGGC GGGCTGGACC CGTTCCGCAT GCTGGCGGAG GTGGGGCTTC CGGCGGACAG CCTGTCTGAT GTCGACCTCA AGATTCCGGC CGACAAGGTG GGCAGGCTGC TTGAGCTGTC TGCCCAGCGC AGCGGCATCG AAACATTTGG CCTGCGGATG GCGGAGACAC GGCGCGCGTC GAACCTCGGT CCATTGATCC TCCTCGTGCG TGACGAGCCG ACGCTGCGCC AGGCATTGCA GGCGATGGCG CGCTACGGCC ATCTGCACAA CGAGGCGATC TTTCTTCACG TCGAAGAAGA AGACGGCATT GCGGTCATCC GTGACGAGGT GCTGGCCAGC GACGTTGGAT CGCTCAAGCA GGCGACCGAG CTGGTTGTAG GGGTGCTGTT CCGGCTGCTG CGCTTCTTCC TTGGTGATGA TTGGCACCCC AAGACCGTCC TTTTTGCGCA TGCCGCGCCG AAAGACCGCT CCGTGCATGC CCGTGTCTTT GGCTCAAACG TGGAGTTCGG CCATGCGTTC AGCGGCATTG TCTGTAACGC CAGCGACCTG GACCTGCCGC TGCCCTCGGC TGATCCCGTC ATGGCACGCT ACGTTCGCCG CTACCTGAAT GATCTTGACC CGGAGGGCGG CAAGCGGATG TCGGACGAGG TCCGCCAGAT GGTGATCATG CTGCTACCGT CCGGCCGTGC CACGGTCGAC CATATCGCGC GGCATCTGGG TGTCAACCGA CGCACCATTC ATCGTCATCT CACGCAGGAA GGCACCACGT TTTCATCGAT TCTCGACGCC GTGCGCAGCG AGCTTGCCGT GCGCTACCTG GACCAGGGTG AGCGCCAATG CGCCGAGATC TCGGGCTTTT TGGGCTTCTC GGAGCCGAGT GCGTTCACAC GATGGTTCAG GGGAACGTTC GGATGCAGCC CGACGCAGTT CAAGGTGTCG AAAGCCAGCG CGTTTGACAA AGGCATGATC AGCCGAAGCC ATGCGGGCGA TCAGAAGAAG AAGACGCGGC GATCGCGTCT TTCGTGA
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Protein sequence | MPYLVRSASL TGYAEAARAG GLDPFRMLAE VGLPADSLSD VDLKIPADKV GRLLELSAQR SGIETFGLRM AETRRASNLG PLILLVRDEP TLRQALQAMA RYGHLHNEAI FLHVEEEDGI AVIRDEVLAS DVGSLKQATE LVVGVLFRLL RFFLGDDWHP KTVLFAHAAP KDRSVHARVF GSNVEFGHAF SGIVCNASDL DLPLPSADPV MARYVRRYLN DLDPEGGKRM SDEVRQMVIM LLPSGRATVD HIARHLGVNR RTIHRHLTQE GTTFSSILDA VRSELAVRYL DQGERQCAEI SGFLGFSEPS AFTRWFRGTF GCSPTQFKVS KASAFDKGMI SRSHAGDQKK KTRRSRLS
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