| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3819 |
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| Symbol | |
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| ID | 6284911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 67725 |
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| End bp | 69101 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642618319 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001892360 |
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| Protein GI | 187926015 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.247868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCG TCACGATGCA ACCCACGCAC GCCGATACCG TACCCCGCAA GTGGCTGGTG
CTGTGTGTGC TCTCCATGGC GGTGCTGGTC GCGCAGATCG ACACAGCCGT GGTGAACTTG
GCCGTACGGC CGATCGGACA GTTCTTCCAT GCGGATGTCG GTCCGCTGCA ATGGGTGATC
GATGCCTACA ACCTTGCCTA CGCTGCACTG CTGCTCAGCG GCGGCCTGCT GGCCGATCTG
TGTGGGCGCC GACGCGCGTT CGTGACAGGC GCGGCGGTGT TCTCGGTGGC GTCGGTGCTG
TGTGCCCTGG CCGCTTCCAT CGGCTGGCTG ATCGGTGCGC GCGCCATGGC AGGCGTCGGG
GCGTCATTGC TGCTGCCCGC ATCGCTGGCG ATCTTGCGCG TGGTGTGGCG CGACCCTGCC
GAACGCGCGC ACGCGCTGGG CGTCTGGGCG GCATGCAACG GCCTGGCCAT GGCGATCGGA
CCAACGGCCG GCGGCTTGTT GGTGACGCAC TTCGGTTGGC GCGCCGTGTT CTGGGTGGTT
GTGCCCGTGA GCGTGGCCAT CATGGTGCTG GCCGTGCGCG TGGTGCCCGA ATCGGCAGAC
GCCGCGCACC GGCGCTTCGA TGCCCTGGCA CAGGTGCTGG GTGCGATTGC TCTGGGCGGC
TTCGCGTTTG CCGCGATCGA GGCCTACCAC GCGCCTACCG TGGGAGGTGG TGTGTTCGTA
CTTGCGCTGG CAGCGTTGGC GTGGTTTGTC CGCGTGGAAG CGCGCCACGG CAGCGCCGCG
CTGGTGCCGC TCGATCTGTT TTCCGTGCGC GAGTTTCGCG GCGCCATCAC TGCCACGGCC
GGGATGACCT TCGGCATGTA CGGCGCGCTT TTTCTGCTGC CGCTCATGTG GCAGAGCACG
GGGCGCTTTA CCGTGGTGGG CGCTGGTATC GCGCTGATGC CGATGGCGCT GGTCTTCATG
GCGGTGTCGC CGACTTCCGG CACGGTGGCG CGCCGGGTCG GCACGCGAAT GGCCACGGCT
GGCGGCGTGG GCATCATTGC GCTGGGGCTG CTGGTGCTGG CCGGATTTGG CGGCGCAGTG
TCGATCGTGC CGTTGGCCAT CGGGCTCGCC CTGACAGGGC TCGGCATGGG CTTCGCCACC
GGCCCGCTGA TGGGGGCCGC CGTGGGCGCG GTCGGGCCGG AGCGTTCGGG CACGGCGTCT
GCACTCGTGA ACGTGGCGCG CATGAGCGGA GCCACGTTGG GCGTCGCCAT GCTGGGCGCG
GTGTATGCCG CGTGCGGCAG TGGCGCCGCT GGGCTGCGTG TGGCCATGCT GTGCGGGGGC
CTCGTCCAAC TGGCTTGCGC GGCCGTGGCC TGGCGGCATG GTGAACAACC CGGCTGA
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| Protein sequence | MDAVTMQPTH ADTVPRKWLV LCVLSMAVLV AQIDTAVVNL AVRPIGQFFH ADVGPLQWVI
DAYNLAYAAL LLSGGLLADL CGRRRAFVTG AAVFSVASVL CALAASIGWL IGARAMAGVG
ASLLLPASLA ILRVVWRDPA ERAHALGVWA ACNGLAMAIG PTAGGLLVTH FGWRAVFWVV
VPVSVAIMVL AVRVVPESAD AAHRRFDALA QVLGAIALGG FAFAAIEAYH APTVGGGVFV
LALAALAWFV RVEARHGSAA LVPLDLFSVR EFRGAITATA GMTFGMYGAL FLLPLMWQST
GRFTVVGAGI ALMPMALVFM AVSPTSGTVA RRVGTRMATA GGVGIIALGL LVLAGFGGAV
SIVPLAIGLA LTGLGMGFAT GPLMGAAVGA VGPERSGTAS ALVNVARMSG ATLGVAMLGA
VYAACGSGAA GLRVAMLCGG LVQLACAAVA WRHGEQPG
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