Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3817 |
Symbol | |
ID | 6285870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 66041 |
End bp | 66868 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618317 |
Product | Beta-lactamase |
Protein accession | YP_001892358 |
Protein GI | 187926013 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.485737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC TCCGCCACGC CGCCACCGGC GCCCTGCTCG CTGCGCTTGC CACCTTTGCC CACGCCGAGC ACCCGATCTG CACGATCGTG GCTGATGCCG CTACGGGCAC GGTCGTCCTG CACGAAGGCA AGTGCGATGA GCGGGTGACG CCCGCTTCGA CCTTCAAGCT GGCGCTGGCT GTCATGGGGT TTGATCACGG CTTCCTCAAG GACGAGCACA CCCCCGTCGA GCACTTCAGG CGCGGTGACC CCGACTGGGG TGGCGAAGCC TGGCACCAGC CCATCGACCC GGCGCTGTGG CTTCAATATT CGGTGGTCTG GTATTCGCAG CGCATTACGC ATGCGATGGG CGCGCAGACG TTCCAGGCCT ACGTGCGTAA GCTCGGCTAC GGCAACATGG ACGTGAGCGG CGACCCGGGC AAGCACAACG GCATGGACCG CTCGTGGATC ACCTCGTCGC TGAAGATCTC GCCGCAAGAG CAGGTCGACT TCATGCGCAG GATCGTCAAC CGGCAGCTGC CGGTGTCCGC GCACACCTAC GAGATGGTCG ACCGTACCGT GCAGACCTGG CAGGTGCCGG GCGGCTGGGC CGTGCAGGGC AAGACGGGCA CCGCCGGCCC GGCGCCAGGC AATACGTCAC CTGATGGCAC GTGGGACCAG GCGCACGCTT ACGGCTGGTT TGTCGGCTGG GCCAAGAAGG GTGATAAGAC GTATGTATTC GCCAACCTCA TCCAGGACGA CAAGGTGGAG CCGACCTCGG GCGGCATCCG CTCGCGCGAT GCGCTGCTTG CCCGCCTGCC GGAAGTGCTG GCCTTTGCGG GGCATTGA
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Protein sequence | MMKLRHAATG ALLAALATFA HAEHPICTIV ADAATGTVVL HEGKCDERVT PASTFKLALA VMGFDHGFLK DEHTPVEHFR RGDPDWGGEA WHQPIDPALW LQYSVVWYSQ RITHAMGAQT FQAYVRKLGY GNMDVSGDPG KHNGMDRSWI TSSLKISPQE QVDFMRRIVN RQLPVSAHTY EMVDRTVQTW QVPGGWAVQG KTGTAGPAPG NTSPDGTWDQ AHAYGWFVGW AKKGDKTYVF ANLIQDDKVE PTSGGIRSRD ALLARLPEVL AFAGH
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