Gene Rpic_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3815 
Symbol 
ID6284904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp63979 
End bp64872 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content62% 
IMG OID642618314 
ProductIntegrase catalytic region 
Protein accessionYP_001892356 
Protein GI187926011 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.382453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTATG CGTTCATCGA GCGAAACCGA CGTTACTGGC CGGTCTCGGT CCTGTGTGAG 
CTGTTAGGGG TCAGCCCCAG CGGCTATCAC CAGCGCAAGC AACGCACAGT AAGCACCGAC
AGGCCAGATA GAGGCCGACT CAGTGACGAT GCCTTGTTGG CCCACATCAA GGCGATTCAC
GCCGGGGTCA AGGGGGAGTA CGGCTGGCCG CGCATGTGGA AGGAACTGCT GGCGCGTGGG
GTGCGGGTGG GCAAGGAGCG TGTTCGCAAG CTGATGGCGC TGCACGGCAT CCGTGCCCGC
CACAAGCGCA AGTACATCGC GACAACCAAC TCGAACCACG ATTTGCCGGT GGCCCCCAAT
CTGCTGCAAC GCGACTTTAG CCCAGCAGCA CCCAATCAAG TCTGGACGAG CGACATAACC
TATGTGGCGA CCGCCGAAGG CTGGCTCTAC CTGGTGGTCA TCATCGACCT GTTCAGCCGG
CAGGTGGTTG GCTGGTCGAT GCAACCACAC ATGAAGGCCG AATTGGTCAC GGACGCGCTG
CGCATGGCCT GGTTCCGGCG CCGCCCGGAA GCCGGTGTGA TTGTGCACAC CGACCGGGGA
AGCCAGTATT GCAGCCATCT GTTTCAAGAC GCCCTGAAGG CGTATGGCAT GCGCTCGTCA
ATGAGCCGCA GGGGCGATTG CTGGGACAAC GCGCCGACTG AGAGTCTGTG GGGGTCGTTG
AAGGTCGCTC GCCTGCACGG TCGCCAGTTC GCTACCCGCC GCGCCGCAAT GGACGAGGTA
ATTGACTGGC TTGGCTTTTA TAATGCCAGC CGACTCCACT CGACGCTGGG CTACGTCAGC
CCCATGACGT TCGAGAAAAA CTGGTCCGCA GCTCAGCAAC ACCGGGCTGC CTAA
 
Protein sequence
MRYAFIERNR RYWPVSVLCE LLGVSPSGYH QRKQRTVSTD RPDRGRLSDD ALLAHIKAIH 
AGVKGEYGWP RMWKELLARG VRVGKERVRK LMALHGIRAR HKRKYIATTN SNHDLPVAPN
LLQRDFSPAA PNQVWTSDIT YVATAEGWLY LVVIIDLFSR QVVGWSMQPH MKAELVTDAL
RMAWFRRRPE AGVIVHTDRG SQYCSHLFQD ALKAYGMRSS MSRRGDCWDN APTESLWGSL
KVARLHGRQF ATRRAAMDEV IDWLGFYNAS RLHSTLGYVS PMTFEKNWSA AQQHRAA