| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3802 |
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| Symbol | |
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| ID | 6284892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 47353 |
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| End bp | 49581 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618303 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001892345 |
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| Protein GI | 187926000 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.799699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.136718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC GCACGCCCGT CGCCAGCGCA CTGCTGGCCC TGTTCGCCAC GCCCCCTGTC
GCGCTCGCCC AACAAGCACC TTCGAGCCCG ATCGCTGCCA CCACCACGTT GCCAGAAGCC
GTCGTTCGGG CGACTGCCCC GCGCGACGAC TACAACGCCG CCAAAAGCTC CATCTCGAAG
CTGCCCGAGA ACCTGCGCGA TGTGCCGCAA TCGGTGACGG TCGTGCCCAA GGCGCTGACC
GACGCGCAAG GCGGCAGCTC GCTGGCCGAT GCGCTGCGCA ACGTGCCGGG CATCACCATC
GGTGCGGCCG AAGGCGGGCA GATCGGCAAC AACATCAACC TGAACGGTTT CTCAGCGCGT
ACCGACATCT ACCTCGACGG CTTCCGTGAT CGCGGTCAGT ACTACCGCGA CCTGTTCGCC
CTCGATTCGG TGGAAGTGCT GATGGGCCCC TCGTCGATGC TGTTTGGCCG CGGTTCAACG
GGCGGCGTTA TCAACCAGGT GACGAAGAAG CCGAAGCTGA AGGCGGCGAC GGAGATCACC
GGTTCGGTCA CGACCAACGG CCTCGTGCGC GCCACCGCCG ACGTCAACAC GCCGACGTCC
GATACCTCCG CCTTCCGCAT CGCCGCGATG GCGCAGAACG GCAAGACGAG CACGCGCGAC
GAGATGACCG CGCAGGATTT CGGCATCGCG CCGTCGTGGC GTTTCGGCAT CGGCACGCCA
ACCGAGGTGA CGCTGTCCGC GTTGCTGCAG CACAACCGCG ACATGCCCGA CTACGGCGTG
CCGAACCTCA ACGGCCACCC GGTCAACGTC AGCCCCAAGA CGTATTACGG CTACACCGAT
GACCGCACCA CGCAGGACGT GGCGTCGTTC TCGGCCAATA TCGATCACAA GTTCTCGCCC
AACCTGCGGC TGCGCAATCA GACGCAGTTC AATTACGTAC AGACCGATGC GCGCGAGACG
GCGCCCAACG CGGTGGGTAC GGTCAATTCG TCAGGCGTGT TCACGGCATT GACCAACAGC
AATCTGCCGC TCTCGGCGCT GTCGGTGCGT CTGCAAAGCC ATGACCGCCG CATCCGTGAC
TATTCGCTGT TCAACCAGAC CGAGCTGACA GCCAAGTTCG ATACGGGTTC GGTCAAGCAC
ACGCTGCTGG TCGGCACCGA GTTCGGCCAC GACGGTTACG ACAACCAAAA CTATTACCGC
AACGGCTCGT GCAACGGCAC GCCGCTGGCG CAGTCGAGCA TGACAAGCGG CTTCGTCTCG
TGCGAGCCAC TGGTCAGCCC GAGCTACACC ACGTCGCCGG CCAGCACGCC GTCGAGCCTG
GGTAACCTGC AGGGCGGCTC GGCCAACACG GTGGCTGCGT ACTTCAACGA TTCGATCGAA
TTCACCAAGC AATGGAAGGC GGTGGCCGGC CTGCGCTACG ACCGCTATGT GGCGAGCATT
TCGAACTCGC TGAATTCAGC GAACACGCCG GCGTCGGCCA AGATCACCGC GCTGCCGTAT
GCGCAGCAGA GCGTGAACTT TGTCAGCACG CGCCTGGGCG GCATCTGGCA GCCGACGGAC
TGGCAGTCGT ACTACGTGTC GTACGGCACG TCGTTCAACC CGTCATTGGA ACAACTCGTG
GGCACCACGG GCCAGCAGGG GTTGGACCCG GAGAAGAACA AGTCGTATGA AGCCGGTGGC
AAGTGGGATC TGCTCAACGG CGATCTGTCG GTCAGCTCGG CGCTGTTCCA GATCACCAAG
GACAACGCCC GCACACAGAT CGACAGCACG ACGTACACGT CGGCCGGCAA GATCCGCGTG
CGCGGTGCGC GCCTGGGTGC CACGGGCCAT GTCACCGACA AGCTGCAGAT CTTCGCGGGC
TATACGTACC TGGATGCGCA GATCGTCAAT GGCATCGCCG CGGGCACGCA GGGCATGACG
CCGGCCAACA CGCCCAAGCA TTCGGCCACA GTGTGGACGA GCTACGCCTT TGTGCCGAAC
TGGGAAGTGG GTGCGGGCGC GTTCTACATG TCCCAGCGGT ATGCCAACAA CACCAACACC
GTGCAGACGG GCGGCTTCGT GCGTTGGGAC GCGATGCTGG CCTACCATCA GCCGAAATAC
GACGTGCGGC TGAACCTGTT CAACGTGTTC AACAAGACGT ATTACGATGC GCTGATTCCT
TCCGATGGCG GTCGCGCCGT GCCGGGCACC GGCCGTGCGG CGATGCTCTC GGTGGTGTAT
CGGATGTAA
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| Protein sequence | MNRRTPVASA LLALFATPPV ALAQQAPSSP IAATTTLPEA VVRATAPRDD YNAAKSSISK
LPENLRDVPQ SVTVVPKALT DAQGGSSLAD ALRNVPGITI GAAEGGQIGN NINLNGFSAR
TDIYLDGFRD RGQYYRDLFA LDSVEVLMGP SSMLFGRGST GGVINQVTKK PKLKAATEIT
GSVTTNGLVR ATADVNTPTS DTSAFRIAAM AQNGKTSTRD EMTAQDFGIA PSWRFGIGTP
TEVTLSALLQ HNRDMPDYGV PNLNGHPVNV SPKTYYGYTD DRTTQDVASF SANIDHKFSP
NLRLRNQTQF NYVQTDARET APNAVGTVNS SGVFTALTNS NLPLSALSVR LQSHDRRIRD
YSLFNQTELT AKFDTGSVKH TLLVGTEFGH DGYDNQNYYR NGSCNGTPLA QSSMTSGFVS
CEPLVSPSYT TSPASTPSSL GNLQGGSANT VAAYFNDSIE FTKQWKAVAG LRYDRYVASI
SNSLNSANTP ASAKITALPY AQQSVNFVST RLGGIWQPTD WQSYYVSYGT SFNPSLEQLV
GTTGQQGLDP EKNKSYEAGG KWDLLNGDLS VSSALFQITK DNARTQIDST TYTSAGKIRV
RGARLGATGH VTDKLQIFAG YTYLDAQIVN GIAAGTQGMT PANTPKHSAT VWTSYAFVPN
WEVGAGAFYM SQRYANNTNT VQTGGFVRWD AMLAYHQPKY DVRLNLFNVF NKTYYDALIP
SDGGRAVPGT GRAAMLSVVY RM
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