Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3798 |
Symbol | |
ID | 6284887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 43153 |
End bp | 44049 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642618299 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001892341 |
Protein GI | 187925996 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.244352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCCG ACCCCTCGAC TTCCTTGCAG TGGGATGACG TGCGCTACTT TCTCGTGCTG GCGCGCGAGG GCAGCCTGTC GGCCGCTGCG CGGCGGCTTG GGGTGGAACA CACCACGGTG GCGCGCCGTG CCGACGCGCT GGAACAGTCG TTGGGCGTGC GTCTGTTCGA CCGTCTGCCA CGCGGCTGGC GCCTGACAGC CGAGGGCAGC GCCTTGGCCG AACGGGCTGA ACGCATGGAG CAGGAAGCCG CCAGCTTTGC ACGCGCAGCG GCAGGAGCGG GCAGCCTGCG GGGGACGGTG CGCATTTCAG CGCCGCCAAC GGTGGCGAGC CACGTCATCG CACCGAACCT GACGTTGCTG CGCAAGCAAT GGCCCGGCAT CGACCTCGTA TTGCTGGGCG AAAAGCGCAA TGCCAACCTG ATGGCACACG AGGCGGATCT CGCCGTCCGT CTGTCACGGC CCACGGCTTC GACACTGGCC GCACGCCCGC TGGGCAGCCT CGGCTATGGC TTATATGCGA CGCCCGAGGT ACTGGCGCAG CCCGAAGCGC AATGGCAGTT CATCGGCTAC GACGAGCGCC TTCGCCACGT ACCCCAGCAG CGCTGGCTGG ACGACTACGC TGGCGCGCGA CGCGTCGTCT TGCGTTGCAG CGACCTGTCG GCCATGCATC AGGCTGCCCT GGCCGGCGTG GGTGTCGCAG CGCTTCCTCA CCTCCTGGGT GCGCCCGCAG AAACGGGTAC GCTCTTGCGG CGCGTGCCGG TGGATGACCC TGCGCTGCAT CGGGAAATCT GGCTTGCCAT TCATCCGGAC GTACGGCGCT CGCCGCGAGT TCGGGCGGTA GCCGATGCGC TGATCGCACT GTTCGATGCG CAGCGGCACG TATTGGCGGG CCATTGA
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Protein sequence | MTADPSTSLQ WDDVRYFLVL AREGSLSAAA RRLGVEHTTV ARRADALEQS LGVRLFDRLP RGWRLTAEGS ALAERAERME QEAASFARAA AGAGSLRGTV RISAPPTVAS HVIAPNLTLL RKQWPGIDLV LLGEKRNANL MAHEADLAVR LSRPTASTLA ARPLGSLGYG LYATPEVLAQ PEAQWQFIGY DERLRHVPQQ RWLDDYAGAR RVVLRCSDLS AMHQAALAGV GVAALPHLLG APAETGTLLR RVPVDDPALH REIWLAIHPD VRRSPRVRAV ADALIALFDA QRHVLAGH
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