Gene Rpic_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3798 
Symbol 
ID6284887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp43153 
End bp44049 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content68% 
IMG OID642618299 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001892341 
Protein GI187925996 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.244352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG ACCCCTCGAC TTCCTTGCAG TGGGATGACG TGCGCTACTT TCTCGTGCTG 
GCGCGCGAGG GCAGCCTGTC GGCCGCTGCG CGGCGGCTTG GGGTGGAACA CACCACGGTG
GCGCGCCGTG CCGACGCGCT GGAACAGTCG TTGGGCGTGC GTCTGTTCGA CCGTCTGCCA
CGCGGCTGGC GCCTGACAGC CGAGGGCAGC GCCTTGGCCG AACGGGCTGA ACGCATGGAG
CAGGAAGCCG CCAGCTTTGC ACGCGCAGCG GCAGGAGCGG GCAGCCTGCG GGGGACGGTG
CGCATTTCAG CGCCGCCAAC GGTGGCGAGC CACGTCATCG CACCGAACCT GACGTTGCTG
CGCAAGCAAT GGCCCGGCAT CGACCTCGTA TTGCTGGGCG AAAAGCGCAA TGCCAACCTG
ATGGCACACG AGGCGGATCT CGCCGTCCGT CTGTCACGGC CCACGGCTTC GACACTGGCC
GCACGCCCGC TGGGCAGCCT CGGCTATGGC TTATATGCGA CGCCCGAGGT ACTGGCGCAG
CCCGAAGCGC AATGGCAGTT CATCGGCTAC GACGAGCGCC TTCGCCACGT ACCCCAGCAG
CGCTGGCTGG ACGACTACGC TGGCGCGCGA CGCGTCGTCT TGCGTTGCAG CGACCTGTCG
GCCATGCATC AGGCTGCCCT GGCCGGCGTG GGTGTCGCAG CGCTTCCTCA CCTCCTGGGT
GCGCCCGCAG AAACGGGTAC GCTCTTGCGG CGCGTGCCGG TGGATGACCC TGCGCTGCAT
CGGGAAATCT GGCTTGCCAT TCATCCGGAC GTACGGCGCT CGCCGCGAGT TCGGGCGGTA
GCCGATGCGC TGATCGCACT GTTCGATGCG CAGCGGCACG TATTGGCGGG CCATTGA
 
Protein sequence
MTADPSTSLQ WDDVRYFLVL AREGSLSAAA RRLGVEHTTV ARRADALEQS LGVRLFDRLP 
RGWRLTAEGS ALAERAERME QEAASFARAA AGAGSLRGTV RISAPPTVAS HVIAPNLTLL
RKQWPGIDLV LLGEKRNANL MAHEADLAVR LSRPTASTLA ARPLGSLGYG LYATPEVLAQ
PEAQWQFIGY DERLRHVPQQ RWLDDYAGAR RVVLRCSDLS AMHQAALAGV GVAALPHLLG
APAETGTLLR RVPVDDPALH REIWLAIHPD VRRSPRVRAV ADALIALFDA QRHVLAGH