Gene Rpic_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3797 
Symbol 
ID6284886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp42354 
End bp43079 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID642618298 
ProductABC transporter related 
Protein accessionYP_001892340 
Protein GI187925995 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.166271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TGCTGGAAGT CAAAGGGCTG CAGGTGTCGT ACGGACACAT CGCAGCCGTC 
AAGGGTATCG ACTTTGCGCT CAAGGCCGGC GAGATCACCT CGCTGGTGGG CGCGAACGGC
GCGGGCAAGT CGACCACGCT GCTGGCGCTC TCGGGGCTGA TCCCGAAGTC GCAGGGCGAC
GTGCGTGGCC AGATCCTGTT CGAGGGGGAC GACGTTTCGC AGTGGTCGGC CCACAAGCGT
GTGGAGCGCG GCATCGTGCA GGTCGCGGAG GGCCGTGCCA CGTTGACCAC CATGACGGTG
CGCGAAAACC TCGAGCTTGG CGCTTATACG CGCAAGGACC GCAGCCAGAT CGCTTCCGAC
CTGGAGCGTG TCTTCCATCT GTTCCCGCGC CTGAAAGAGC GCATTGATGG CATGGCCGGC
AACCTGTCGG GCGGCGAACA GCAGATGCTC GCCATCGGCC GCGCGTTGAT GGCCCGCCCC
CGTGTGCTGC TGCTTGACGA GCCGTCGATG GGCCTCGCAC CGATCATTGT GCAGGAGATT
TTCCGCATCC TGCGCACCAT CAACGCGGAA GGACTGACGA TCTTCCTGGT TGAGCAGAAC
GTGCGGCAGG CGTTGAAGAT CGCGCAGCAC GGCTATGTGT TGGAGACCGG TCAGATCGTG
CTGGCCGACA GCGGGCGCAA CCTGCTGGGC AATCCGCGCG TGCTCGAGGC CTACCTCGGC
GGCTGA
 
Protein sequence
MTTLLEVKGL QVSYGHIAAV KGIDFALKAG EITSLVGANG AGKSTTLLAL SGLIPKSQGD 
VRGQILFEGD DVSQWSAHKR VERGIVQVAE GRATLTTMTV RENLELGAYT RKDRSQIASD
LERVFHLFPR LKERIDGMAG NLSGGEQQML AIGRALMARP RVLLLDEPSM GLAPIIVQEI
FRILRTINAE GLTIFLVEQN VRQALKIAQH GYVLETGQIV LADSGRNLLG NPRVLEAYLG
G