Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3797 |
Symbol | |
ID | 6284886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 42354 |
End bp | 43079 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618298 |
Product | ABC transporter related |
Protein accession | YP_001892340 |
Protein GI | 187925995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.166271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC TGCTGGAAGT CAAAGGGCTG CAGGTGTCGT ACGGACACAT CGCAGCCGTC AAGGGTATCG ACTTTGCGCT CAAGGCCGGC GAGATCACCT CGCTGGTGGG CGCGAACGGC GCGGGCAAGT CGACCACGCT GCTGGCGCTC TCGGGGCTGA TCCCGAAGTC GCAGGGCGAC GTGCGTGGCC AGATCCTGTT CGAGGGGGAC GACGTTTCGC AGTGGTCGGC CCACAAGCGT GTGGAGCGCG GCATCGTGCA GGTCGCGGAG GGCCGTGCCA CGTTGACCAC CATGACGGTG CGCGAAAACC TCGAGCTTGG CGCTTATACG CGCAAGGACC GCAGCCAGAT CGCTTCCGAC CTGGAGCGTG TCTTCCATCT GTTCCCGCGC CTGAAAGAGC GCATTGATGG CATGGCCGGC AACCTGTCGG GCGGCGAACA GCAGATGCTC GCCATCGGCC GCGCGTTGAT GGCCCGCCCC CGTGTGCTGC TGCTTGACGA GCCGTCGATG GGCCTCGCAC CGATCATTGT GCAGGAGATT TTCCGCATCC TGCGCACCAT CAACGCGGAA GGACTGACGA TCTTCCTGGT TGAGCAGAAC GTGCGGCAGG CGTTGAAGAT CGCGCAGCAC GGCTATGTGT TGGAGACCGG TCAGATCGTG CTGGCCGACA GCGGGCGCAA CCTGCTGGGC AATCCGCGCG TGCTCGAGGC CTACCTCGGC GGCTGA
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Protein sequence | MTTLLEVKGL QVSYGHIAAV KGIDFALKAG EITSLVGANG AGKSTTLLAL SGLIPKSQGD VRGQILFEGD DVSQWSAHKR VERGIVQVAE GRATLTTMTV RENLELGAYT RKDRSQIASD LERVFHLFPR LKERIDGMAG NLSGGEQQML AIGRALMARP RVLLLDEPSM GLAPIIVQEI FRILRTINAE GLTIFLVEQN VRQALKIAQH GYVLETGQIV LADSGRNLLG NPRVLEAYLG G
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