Gene Rpic_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3778 
Symbol 
ID6284863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp17929 
End bp18711 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID642618279 
Producthypothetical protein 
Protein accessionYP_001892321 
Protein GI187925976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.157644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0998357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC AGATCAAGAA GATCGCAGCC GTGCTGCTGT TGGGTTCGCT CGGTATGCTC 
GCGGCGTGTG GCGGCGGCAG TGATGACATT GGCCAGATCA TCGGTACCAG CTCACCGCAG
TACCGGACGA TGCACGTCAA TCCATTCATT GGTAACGTGG ACTTCGGGGT CAACGGCACC
ACCAGGATCG CCAATGTCGG CTTCAAGAAC GTTAGCAACT ATTTCGGTAT CGATGCCGTT
GCGACGACCG CCACAGTGTC AAACGCTGGC AGCGCGACAC CGCTTGCTTC GGCCAATTTC
AATCCGGCCA ACGGTCATCG CTATACGGCG CTTGCCATCG TAGGCGCCAC GGCCTCGGCC
ACCAGCCTGG CGATCATCGA TGATCCATAT GACAAATCGA TTCTCTCGGA CAAGGCGCGT
GTGCGTACCT TCAACGCCGC GTACAACGCC CCCAATGTCG ATGTCTACGT GACGGCGCCG
AACGCGGATA TTTCGGCTGT GCCACCGACC ATGGGCGGCG CCGCATACGG TAGCGCGTCG
CCTGCCAGCA CACAGGATTC CATCTATGTG GACGGTGGCA CGTACGAGAT ACGCGTGACG
ACGGCCGGCA CAAAGAGCGT CATCTTCGCC TCGCAGCCAT TCAGCCTGGC CAACAATGCG
GACTGGCTGA TCACCACGCT GCCCGCAGGC GGCGCGGGCA CGGTCACCCC CAACGCCATC
CGCGTGCTCG TGGCCCAGGC CAACGGCGCA TCGCAAACGG CTTCCGAATT ACCCGCGCAG
TAA
 
Protein sequence
MKMQIKKIAA VLLLGSLGML AACGGGSDDI GQIIGTSSPQ YRTMHVNPFI GNVDFGVNGT 
TRIANVGFKN VSNYFGIDAV ATTATVSNAG SATPLASANF NPANGHRYTA LAIVGATASA
TSLAIIDDPY DKSILSDKAR VRTFNAAYNA PNVDVYVTAP NADISAVPPT MGGAAYGSAS
PASTQDSIYV DGGTYEIRVT TAGTKSVIFA SQPFSLANNA DWLITTLPAG GAGTVTPNAI
RVLVAQANGA SQTASELPAQ