Gene Rpic_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3776 
Symbol 
ID6284861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp14139 
End bp15458 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content68% 
IMG OID642618277 
Productprotein of unknown function UPF0118 
Protein accessionYP_001892319 
Protein GI187925974 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.165443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCC CGCGCGGAAC AGGGCGCACC ACGTTCCTTG CCATGTCCGA CCCGCTTCCG 
ACCCACTCGA CGCAGGCGCC TCCAGGCCCC GGGCCGGCGC CCCAGCCGAC GCTATTGACC
GGCCTCCAGC AGCCGGCGTG GCGGCTGGCG ATGGTGCTGG TCGCCATTGG CGGCACGCTG
GTCTTCCTGC AGTGGGCCCG CGTGTTCCTG GTGCCGCTTA CGTTTGGTGT GGTGCTCGCA
TTTGCGCTGA ATCCGCTGGT GGTACGCCTG CAGCATTGGT ATGTGCCGCG CCCCGTGGCA
GCGGCTGTCA TCGTGCTTGG CTTGTGGCTC GCAGGCGGTG CGGTGGTCTT CGGCATGCAG
GATGGCGTGT CTGCCGTGGC CGAGCGCGTT CCGCTGGCGG CAGAGCGCAT GGCTGAATCG
GTCGATCGGG TCCGTGATCG CCTGAGCGGT GCAGTGGACA AGATGCGGCA AGTGACGACG
GCCGTCGAGC ATGCGACCGA AGGCGTGCCG GCCAAGCCGC CGTCGCAGCC TGCACGGCGT
CCGGCGGCAG CCGCGCCACC CGCGCCACAC GACACGCTGC CGGTATTGCC CCTGCGCGAG
TTCGTGTGGA CAGGATCGGC CAGCCTGTTT GCCCTGGCCG GGCAACTGGT GGTGGTCTCG
TTCCTCGTGT ACTTCCTGCT CGCTTCCGGG CAGGCGCTCA AGCGCAAATG GGTACGGGCG
GTTGGTCGCA CCCTGAGCGA GAAGAAGCGG GCGGTGCGGA TGATGGCCGG GATCGGCACC
CAGATCCAAT ACTCGCTGCT GGTGCTCTTC GCCAGCAACA TCATGCTGGG GATCCTGACG
GCCGTGGCCT TTGCGCTTCT GGGTATGGAC GACGCGACGG TGTGGGGCCT GGCGGCGGCC
GTGTTGCACT TCGTGCCGTA CCTCGGTTCG GTCGTGATGG TGGTGGCCAG CGGCATCGGC
GCCTATCTGC AGATGGGCAC CTGGGCGGAT GCGTTGATCG TGGCGGGAAC GACCCTCGTG
TTTGCCACGC TGGTCGGCAC GTTGCTCATG ACCTGGCTGC AGAGCCGTGC GTCCAAGCTG
GACCCGTGCG TGGTCTATAT CGGGTTGCTG CTGTGGGGCT GGCTGTGGGG AGTGTGGGGG
TTGCTGCTGG GGACCTCTGT CACGGCAATG ATCAAGGTGG TGTGCGATCA CGTCGAGCGG
CTGCGCCCGC TTGGCGTCCT GCTTGGCACG ACCGACGCGC CCGCGGGGGT ATGGCAACGC
CTGCTCGATC GTCTGCGCGG CAGGCCGACA CGGCGCCGGC AAGGCGCGCC GCGGCGTTGA
 
Protein sequence
MPRPRGTGRT TFLAMSDPLP THSTQAPPGP GPAPQPTLLT GLQQPAWRLA MVLVAIGGTL 
VFLQWARVFL VPLTFGVVLA FALNPLVVRL QHWYVPRPVA AAVIVLGLWL AGGAVVFGMQ
DGVSAVAERV PLAAERMAES VDRVRDRLSG AVDKMRQVTT AVEHATEGVP AKPPSQPARR
PAAAAPPAPH DTLPVLPLRE FVWTGSASLF ALAGQLVVVS FLVYFLLASG QALKRKWVRA
VGRTLSEKKR AVRMMAGIGT QIQYSLLVLF ASNIMLGILT AVAFALLGMD DATVWGLAAA
VLHFVPYLGS VVMVVASGIG AYLQMGTWAD ALIVAGTTLV FATLVGTLLM TWLQSRASKL
DPCVVYIGLL LWGWLWGVWG LLLGTSVTAM IKVVCDHVER LRPLGVLLGT TDAPAGVWQR
LLDRLRGRPT RRRQGAPRR