| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3772 |
|---|
| Symbol | |
|---|
| ID | 6285318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 11010 |
|---|
| End bp | 11804 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642618273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001892315 |
|---|
| Protein GI | 187925970 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3233] Predicted deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.516985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0626785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGCT ACCTCATTCT CGCCATGCAC GATGTCACAC CGGCCACGTG GCCGGCATGC
AAGGTCCTGC TGAACGCGCT GGATGAGGTG TGCCGGGTAC CGAAATCCCT GCTGGTCATT
CCGAACTTCT ATCGTGGCCC GACCGCACGC AACAGCGACC GCTTCTGCCG CTTGATGAGC
GAATGCCTGG CAGAAGGCGA CGAACTCGTG CTGCACGGCT ATGCGCATCT GGACGATCAG
CCGCCCGGCG GCATCCTCGA TCAACTGATC CGCACCCGGT ACACGGCCGG CGAGGGCGAG
TTCGCTGCCA TACCGCTCGC GGCCGCTCGC CACCGGATCG AGGCCGGAGC CGCCTGGTTT
GCCGCCAACG GTTGGCCGCT GCACGGCTTC GTCGCCCCGG CGTGGTTGAT GAACGCCGCC
ACGTGGCAGG CGCTCGACGG ATTGCCGCTG CGCTACACGA CGACGCTGCG GCGCTTCTTT
CTGCTGCACC CGACACGCGC ACTCGCTGCA CCATGCCTGA CCTACAGCGT CCGCACCCCT
GCGCGACGAC TGGTTTCGCG CTACTACCTG CAGTGGCTGG CCCGGCAGCA TGCAAATCTG
CCAGTGCTCC GCCTCGGCCT GCATCCGGCC GATGCCGCCC ATCGGGATGT CATCCGCCAT
TGGCAGGAGC TGCTCGCGTC GAGCCTGGAG ACGCGCACGC CCGTCACCAA GAACGGCTTT
GCGCAGGTGT TCACGCAGGC GTGGATGAGC GGCCCGGAAA CCGCATCCGC CGGCCATCCG
CAGACGTCGT ACTAG
|
|---|
| Protein sequence | MSRYLILAMH DVTPATWPAC KVLLNALDEV CRVPKSLLVI PNFYRGPTAR NSDRFCRLMS
ECLAEGDELV LHGYAHLDDQ PPGGILDQLI RTRYTAGEGE FAAIPLAAAR HRIEAGAAWF
AANGWPLHGF VAPAWLMNAA TWQALDGLPL RYTTTLRRFF LLHPTRALAA PCLTYSVRTP
ARRLVSRYYL QWLARQHANL PVLRLGLHPA DAAHRDVIRH WQELLASSLE TRTPVTKNGF
AQVFTQAWMS GPETASAGHP QTSY
|
|---|
| |