Gene Bphyt_7232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7232 
Symbol 
ID6280307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3618414 
End bp3619214 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID642618252 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001890888 
Protein GI187921856 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGT TACTCGCGAA TCAGGTCGCT CTGGTCACCG GCGGCAGTTC GGGCATTGGT 
TCCGGCGTCG CCAAAGCGCT TGCGGATGCG GGCGCGGCCG TCGTCGTGGA CTACCACTCG
CATGCCGAAG AGGCGGAGCA ACTCTGCGCC GAGATCGAGA AAGCCGGCGG CGCCGCGCTT
GCGGTGCAAG CCGACGTCGC CAATCCCACG CAGGTCGATA AGATGTTCGC GGCATGCCGC
GCGCGTTTCG GAAGCGCGGA TATCGTGGTC GCGAATTCGG GCGTGCAGAA AGATAATGCG
TTTGCCGATA TGACGCTGGA CGACTGGCAA CAGGTGCTGG CGACCAATCT CACCGGCCAG
TTCCTGACCG CACAAGCGGC AGTGAAAGAA TTCCGCCGAC GCGGCCCGAC GGCCACGTCC
AAAGCGCTCG GCAAGATCAT CTGCATGAGC TCGGTTCACG AAGTCATTCC GTGGGCGGGG
CACGTCAATT ACGCGGCGTC TAAAGGCGGC ATTCAGATGT TCATGAAATC GCTCGCGCAG
GAAGTCGCGC CCGAACGCAT CCGCGTCAAT TCCATTGCGC CGGGCGCGAT TCGCACGCCG
ATCAATAAGG ACGCGTGGGA CACCAAAGCC GCGCTGGAGA AACTGTTGAA GCTGATTCCC
TACGGCCGTG TGGGCGAAGC GGACGACATC GGCAAGGCCG CCGTCTGGCT CGCCTCGGAT
GAAAGCGACT ACGTGGTCGG CACGACCTTG TTCGTCGACG GCGGCATGAC GCTCTATCCC
GGTTTCACCG ATAACGGTTA G
 
Protein sequence
MEKLLANQVA LVTGGSSGIG SGVAKALADA GAAVVVDYHS HAEEAEQLCA EIEKAGGAAL 
AVQADVANPT QVDKMFAACR ARFGSADIVV ANSGVQKDNA FADMTLDDWQ QVLATNLTGQ
FLTAQAAVKE FRRRGPTATS KALGKIICMS SVHEVIPWAG HVNYAASKGG IQMFMKSLAQ
EVAPERIRVN SIAPGAIRTP INKDAWDTKA ALEKLLKLIP YGRVGEADDI GKAAVWLASD
ESDYVVGTTL FVDGGMTLYP GFTDNG