Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7232 |
Symbol | |
ID | 6280307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3618414 |
End bp | 3619214 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642618252 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001890888 |
Protein GI | 187921856 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGT TACTCGCGAA TCAGGTCGCT CTGGTCACCG GCGGCAGTTC GGGCATTGGT TCCGGCGTCG CCAAAGCGCT TGCGGATGCG GGCGCGGCCG TCGTCGTGGA CTACCACTCG CATGCCGAAG AGGCGGAGCA ACTCTGCGCC GAGATCGAGA AAGCCGGCGG CGCCGCGCTT GCGGTGCAAG CCGACGTCGC CAATCCCACG CAGGTCGATA AGATGTTCGC GGCATGCCGC GCGCGTTTCG GAAGCGCGGA TATCGTGGTC GCGAATTCGG GCGTGCAGAA AGATAATGCG TTTGCCGATA TGACGCTGGA CGACTGGCAA CAGGTGCTGG CGACCAATCT CACCGGCCAG TTCCTGACCG CACAAGCGGC AGTGAAAGAA TTCCGCCGAC GCGGCCCGAC GGCCACGTCC AAAGCGCTCG GCAAGATCAT CTGCATGAGC TCGGTTCACG AAGTCATTCC GTGGGCGGGG CACGTCAATT ACGCGGCGTC TAAAGGCGGC ATTCAGATGT TCATGAAATC GCTCGCGCAG GAAGTCGCGC CCGAACGCAT CCGCGTCAAT TCCATTGCGC CGGGCGCGAT TCGCACGCCG ATCAATAAGG ACGCGTGGGA CACCAAAGCC GCGCTGGAGA AACTGTTGAA GCTGATTCCC TACGGCCGTG TGGGCGAAGC GGACGACATC GGCAAGGCCG CCGTCTGGCT CGCCTCGGAT GAAAGCGACT ACGTGGTCGG CACGACCTTG TTCGTCGACG GCGGCATGAC GCTCTATCCC GGTTTCACCG ATAACGGTTA G
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Protein sequence | MEKLLANQVA LVTGGSSGIG SGVAKALADA GAAVVVDYHS HAEEAEQLCA EIEKAGGAAL AVQADVANPT QVDKMFAACR ARFGSADIVV ANSGVQKDNA FADMTLDDWQ QVLATNLTGQ FLTAQAAVKE FRRRGPTATS KALGKIICMS SVHEVIPWAG HVNYAASKGG IQMFMKSLAQ EVAPERIRVN SIAPGAIRTP INKDAWDTKA ALEKLLKLIP YGRVGEADDI GKAAVWLASD ESDYVVGTTL FVDGGMTLYP GFTDNG
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