| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7226 |
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| Symbol | |
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| ID | 6279125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3610874 |
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| End bp | 3611929 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618246 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_001890882 |
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| Protein GI | 187921850 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.201609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CGCTTCTCCT CAACGCCGCC GCGCGTGCCC GCATTCCCGA CATTGCGCGC
GCCGCCGGTG TGTCGACCGC CACGGTGGAT CGTGTGCTCA ATGGCCGTGA AGGCGTGCGT
GCGGTGACGG CGCAACGCGT GCTGCAAGCG GCCGCCCAAC TCGGCTATCT GCTCACGCCA
GAGGCGCCCG TCGTGCCCGC CTCGAAGCCG ATGCGCATCG CGTTCCTGCT GCCTGCCGGC
ACCAATCGCT ATTTGCATAT GCTCGGCGAC TACATCGACT TCGCACACGA TCAGTGGAAC
GCGCTGGACA TGAAGTGCCG CGTGCACTAC GTCGAGAGTT TCAACCCGAA GGAATTGGCC
GACCGTCTGT TGCATTACGG GCAGCGTGCG GATGGCGTCG TGTTCATGGC GCTCGAACAT
CCCGTTGTGC GCGACGCCGT AAATGCGTTG GCGGATCAGG GCGTGCCGGC CATCACGCTG
ATTTCTGACC TATCGAATGC GCGACGGCTC GCTTATGTGG GCATCGACAA TCGATCGGCG
GGACGCACGG CGGCGTTGCT GCTCGGGCGC TTCATGGGCC CGCGCCCTAG CGGAAAGATC
GCGATGCTCG CCGGCAGCCT CAACTATCGC GGGCATGAAG AACGCGAGAT CGGTTTTCTG
CATTTGATCG AATCGACGTT CCCACAAGTG CGCGTGATCG GCCTACGCGA AGGGCACGAC
GATAGCGAGC GCAACTATAT GCAGACGCGC AAGCTGCTTG AACAGCATCC CGATCTTGCC
GGCATTTACA ACAGCGGCGG CGGATCGGAT GGCGTGGCGC GCGCGATTGT CGAGGCGCGT
TCTGAGCAGA AGATTCTGTT TGTCGGGCAT GGCTTGACGC CCGACACGCG AGCGTTGCTG
ATCGACGGCA CCATGGATGC GTTGATCACG CAAACGCCGC AGGCTATGGT GGGAAATTGT
CTGCGTATTT TCCGCAACGT GCGCGAGAAG CGCGATGCGA TGAGCGACGT GAAGCCCGTG
CAATTCAGCA TCATTCTGCG GGAGAATTTG CCTTGA
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| Protein sequence | MSDTLLLNAA ARARIPDIAR AAGVSTATVD RVLNGREGVR AVTAQRVLQA AAQLGYLLTP
EAPVVPASKP MRIAFLLPAG TNRYLHMLGD YIDFAHDQWN ALDMKCRVHY VESFNPKELA
DRLLHYGQRA DGVVFMALEH PVVRDAVNAL ADQGVPAITL ISDLSNARRL AYVGIDNRSA
GRTAALLLGR FMGPRPSGKI AMLAGSLNYR GHEEREIGFL HLIESTFPQV RVIGLREGHD
DSERNYMQTR KLLEQHPDLA GIYNSGGGSD GVARAIVEAR SEQKILFVGH GLTPDTRALL
IDGTMDALIT QTPQAMVGNC LRIFRNVREK RDAMSDVKPV QFSIILRENL P
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