Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7212 |
Symbol | |
ID | 6277688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3598842 |
End bp | 3599729 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618232 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001890868 |
Protein GI | 187921836 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.858542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGATT CTTTCGACAC TTCTCACACT CACCCCGCCG CCGATGCGAA ACCGCAGCGC GGCATCCAGT CGCTCGATAG CACGGGCGAA TTGTTGGCGG CGCTGGTCGC GGCGGCGCGG CCGTTGAACC TGCGCGATCT TGCGGCGGCT GCGGGCATGC CGCCGGCAAA GGCGTTTCCG CATCTGGTGA GTCTGCTGAA AATCGGCTTG CTCAATCGCG ATGCATCGGG CTGTTTCGAA GCCGGGCCGC TCGCGCTGGA GTTGGGTTTG ATCGGTTTAC AGCGCTTGTC GCCGACGCGT GAAGCGGAGC CCGAAGTGGT CGAACTGGCG GCCTCGACGG GCATGAGCGT CGCGATGGCG GTGCTCGGTC CGCTCGGGCC GACGGTCGTG CGTCTGGAGG AATCGGCGCG GCCGCTGCAT GTGAGCCTGC GGGTCGGCAC GGTGATGTCG CTGGCGAATA CGGCGATCGG CCGAGTGTTC GCCGCCTATG TCGCGGACGA TGTGCGCGCG GGTTTGCTGG TGCAGGATCA TCTGCGGTTG GCGGGGGCGG ATGCGGCGGA GGTTTTTGCA GGAAAGCCGG TGCCGGCGGG CAAAGGTAAA GCGGCGGGCG GCACGGACAC CGCGTCGGCG TTGCCGCCAC TGACGCAAGC CTACGCGCAG CGTCTTGCGC AAATCCGTGC GGATGGAATC GATACGGCGC TCAGCCGGCC TGTCCCGGGC ATTGATACGC TCGCCGCGCC GGTGCTGGAT CATACGGGCA GCATCTGCCT CGTTCTGGCG TTGATGGGCC CGAGCGGCAG CTTCGACAGT GAATTGGCGG GTGGGCCGGC GCAGACTTTG CGCGCCGCGA CTTCGAGGTT GTCGCGGCGT TTTGGGTGGA TGGCATAG
|
Protein sequence | MTDSFDTSHT HPAADAKPQR GIQSLDSTGE LLAALVAAAR PLNLRDLAAA AGMPPAKAFP HLVSLLKIGL LNRDASGCFE AGPLALELGL IGLQRLSPTR EAEPEVVELA ASTGMSVAMA VLGPLGPTVV RLEESARPLH VSLRVGTVMS LANTAIGRVF AAYVADDVRA GLLVQDHLRL AGADAAEVFA GKPVPAGKGK AAGGTDTASA LPPLTQAYAQ RLAQIRADGI DTALSRPVPG IDTLAAPVLD HTGSICLVLA LMGPSGSFDS ELAGGPAQTL RAATSRLSRR FGWMA
|
| |