Gene Bphyt_7212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7212 
Symbol 
ID6277688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3598842 
End bp3599729 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID642618232 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001890868 
Protein GI187921836 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.858542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATT CTTTCGACAC TTCTCACACT CACCCCGCCG CCGATGCGAA ACCGCAGCGC 
GGCATCCAGT CGCTCGATAG CACGGGCGAA TTGTTGGCGG CGCTGGTCGC GGCGGCGCGG
CCGTTGAACC TGCGCGATCT TGCGGCGGCT GCGGGCATGC CGCCGGCAAA GGCGTTTCCG
CATCTGGTGA GTCTGCTGAA AATCGGCTTG CTCAATCGCG ATGCATCGGG CTGTTTCGAA
GCCGGGCCGC TCGCGCTGGA GTTGGGTTTG ATCGGTTTAC AGCGCTTGTC GCCGACGCGT
GAAGCGGAGC CCGAAGTGGT CGAACTGGCG GCCTCGACGG GCATGAGCGT CGCGATGGCG
GTGCTCGGTC CGCTCGGGCC GACGGTCGTG CGTCTGGAGG AATCGGCGCG GCCGCTGCAT
GTGAGCCTGC GGGTCGGCAC GGTGATGTCG CTGGCGAATA CGGCGATCGG CCGAGTGTTC
GCCGCCTATG TCGCGGACGA TGTGCGCGCG GGTTTGCTGG TGCAGGATCA TCTGCGGTTG
GCGGGGGCGG ATGCGGCGGA GGTTTTTGCA GGAAAGCCGG TGCCGGCGGG CAAAGGTAAA
GCGGCGGGCG GCACGGACAC CGCGTCGGCG TTGCCGCCAC TGACGCAAGC CTACGCGCAG
CGTCTTGCGC AAATCCGTGC GGATGGAATC GATACGGCGC TCAGCCGGCC TGTCCCGGGC
ATTGATACGC TCGCCGCGCC GGTGCTGGAT CATACGGGCA GCATCTGCCT CGTTCTGGCG
TTGATGGGCC CGAGCGGCAG CTTCGACAGT GAATTGGCGG GTGGGCCGGC GCAGACTTTG
CGCGCCGCGA CTTCGAGGTT GTCGCGGCGT TTTGGGTGGA TGGCATAG
 
Protein sequence
MTDSFDTSHT HPAADAKPQR GIQSLDSTGE LLAALVAAAR PLNLRDLAAA AGMPPAKAFP 
HLVSLLKIGL LNRDASGCFE AGPLALELGL IGLQRLSPTR EAEPEVVELA ASTGMSVAMA
VLGPLGPTVV RLEESARPLH VSLRVGTVMS LANTAIGRVF AAYVADDVRA GLLVQDHLRL
AGADAAEVFA GKPVPAGKGK AAGGTDTASA LPPLTQAYAQ RLAQIRADGI DTALSRPVPG
IDTLAAPVLD HTGSICLVLA LMGPSGSFDS ELAGGPAQTL RAATSRLSRR FGWMA