| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7169 |
|---|
| Symbol | |
|---|
| ID | 6279398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3562186 |
|---|
| End bp | 3563556 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642618190 |
|---|
| Product | protein of unknown function DUF1214 |
|---|
| Protein accession | YP_001890826 |
|---|
| Protein GI | 187921794 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAA GGAAAATCCG TCTCGTGAAA CGACTCCTCA CCCTCGTTCT CGCTATAGCG
GCACTCACTG TATTTCCCGT CTCGGCAATC GCCCAGCAAA ACAGCGAGTC GCCGGCCGTT
AAGGCCAACA CGATCTCCGA TGAGGACATC AGTCAGTCCT ATCTCTACCT GCTCAGCCGG
CTGCTGGTCG CGCGCCAGGA GCAACTCGAC TTTAAGGAGG GCTTCCGATG GAACGAGCTG
GTCCACCGTA AGCCCGGCGC GGTGGACTGG CCCAATCCCA ATCTGGATGT CGCGTACTCC
GAAGCGTGGG TGGCTGTCGA TGAGACTAGC TGCACTATCG TAAGCGTGCC GCAGATCAAG
GGCCGCTACT TCACCGTGCA GTTCTTGAAT GGTTGGGGTG AAACCCTGGC CAACATTAAC
GAGCGTCTGT TTCCGCAAAA GCCATACGGC GACTTTGCGG TGTGCCTGCG TGGAGCCAAC
GTGTCGCTCC CGGAAGGAGC CCGCCGCATC GACCTGCCGG TCAAGTCCGC ACGGATGTTG
GCGCGCGTGG CGCTGGGCAC TGACAGGGAT GGTGCAGTCG CGCTGCAGCA CGAATTCAGA
TTGGCAGCGA CCGGTTCTCC AAAGCTGCCC GTCATTCCGA AAGCTTTGAT GTTCGAGCCG
GAGAAACTTC CGGGCGTCGA GGCTTTTGAT TCAGCAAGGA CGGCGCTCGA CAGCGAGCCC
GATCTGAACC CCGGTTTCCA GTCGATGCAG CAGTTGACCC GTCGCGTGGC CGAAGCGGCA
ACTCAACCCG CCGAGCGAGC GCGCATTGAT CGCGTCGTGC GCACGCGCGC CATGGAGGAG
TTCGGCAAGG CGGGCGCGAT CATCGGGCAC GGCACGATAC ACGATGGCTG GGCGCGCCCG
GATGTGGTCG GTGAGTACGG ACTCGACTAT CTCGCTCGAA CCTTGGTCAA CTATGGCGGC
ATCTGGGCAA ACATCAAGCC GGAGGTGCTC TATTACCGCT GTTCCATCGA TGCAAACGGC
GCACCGTTGA GCGGCGATCA CGTCTACAAA CTGACCTTCC CGAAAGACGC GTTGCCGACG
CGCTTTGCCC GATATTTCTG GTCGGTTATC GCGGTCGACG ACAAGCGGTT CCGCGTGCTG
AATAACCCGC AACAGAAATA TCTGCTCAAC GACGCGCAGG GTCTGACGTA CGGTGCGGAT
GGCTCGCTGA CCCTGTATTT TGCGGCGGAA AAACCAGCGG ATGCGCCAGC GGGCAACTGG
CTGCCGACGC CGCGCGGTAC GCAATACCGC CTGACGTTCC GGTACTACGG TCCACTTGAC
GGCGTGGCCA ATGGCACGTA CTACCCGCCC CCAATGACGA GAGTCCAGTA A
|
|---|
| Protein sequence | MQQRKIRLVK RLLTLVLAIA ALTVFPVSAI AQQNSESPAV KANTISDEDI SQSYLYLLSR
LLVARQEQLD FKEGFRWNEL VHRKPGAVDW PNPNLDVAYS EAWVAVDETS CTIVSVPQIK
GRYFTVQFLN GWGETLANIN ERLFPQKPYG DFAVCLRGAN VSLPEGARRI DLPVKSARML
ARVALGTDRD GAVALQHEFR LAATGSPKLP VIPKALMFEP EKLPGVEAFD SARTALDSEP
DLNPGFQSMQ QLTRRVAEAA TQPAERARID RVVRTRAMEE FGKAGAIIGH GTIHDGWARP
DVVGEYGLDY LARTLVNYGG IWANIKPEVL YYRCSIDANG APLSGDHVYK LTFPKDALPT
RFARYFWSVI AVDDKRFRVL NNPQQKYLLN DAQGLTYGAD GSLTLYFAAE KPADAPAGNW
LPTPRGTQYR LTFRYYGPLD GVANGTYYPP PMTRVQ
|
|---|
| |