| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7161 |
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| Symbol | |
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| ID | 6278289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3553581 |
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| End bp | 3555221 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618182 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001890818 |
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| Protein GI | 187921786 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.11135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCGT CAGCACACGT CGATACCTTC GCGCGCGACA ATCTTCCGCC GCAGGATCAA
TGGCCCGTCT TTCTGCTCGA CAACCCGGAC GTCGCATACC CGGCGCGCTT GAACTGCGCG
TCGGAGTTGC TCGACAGAAC CATCGATGCG GGCCACCGTG ATGATCCCGC GATCTGGTCC
GATGTCGACG GGGCACCGCG CGCCACCACT TACGGTGAGC TGCTGGCACT TGTGAATCGC
AGCGCGCACG TGCTGGTCGA CGAAATGGGA CTGCAGCCCG GCAACCGCGT TTTACTGCGC
GGCCCGAACA CGCTGCATAT GGCCGTGACC GCACTCGCTG CGCTGAAGGT TGGGCTCGTC
GTAGTGCCGA CCATGCCGCT TCTGCGAGCC AAGGAACTGA AGCAGATCAT CGATAAAGCG
CAAGTTGGCG CGGCGTTGTG CGACGCGCGC CTGACCGCCG AACTCGCGCG CTGCAGCGAT
CCAGAAGACG AGTTTTACTG CGCGGGCTTG ATGCAAACCC GCCTCTTCCA CGACGACTCC
CCTGATTCAC TCGACACGCT CGCGGTCAAC AAGCCCGACC ACTTCACCGC GTGCGACACC
GCCGCCGACG ACGTCTGCCT GATCGCCTTC ACCAGCGGCA CGACCGGCGC GCCGAAAGGC
TGCATGCACT TTCATCGCGA TGTCGTGGCC ATGTGCGATC TGTTTCCGCG TCACGTACTC
AAACCTACGT CGAGCGATAT CTTTTGCGGT ACGCCGCCGC TCGCCTTTAC TTTCGGGCTT
GGCGGCTTGC TGTGTTTTCC ATTGCGAGTG GGCGCGTCCA CGGTGCTGAT CGAGAAGCTC
ACGCCCGAGA CTTTGCTGCA GACCGTCGAA CGTTTTCATG CGACCGTCAT GTTCACCGCG
CCGACCTTCT ATCGGCAAAT GGCGCCGCTG GTTGCACACC ACGACGTCTC TTCGTTGAAG
AAAACCGTGT CGGCGGGCGA GGCGTTGCCG GATTCGACGC GGCGTTTGTG GCGCGACGCG
ACCGGCATCG ACATGATCGA CGGTATTGGC GGCACCGAGT TGATCCACAT TTTCATTTCG
GCGCAGGGCG ACGAAATTCG CCCGAACGCC ATCGGCCGCG CGGTGCCGGG TTACGCCGTG
CAGGCCGTGG ATGACGACAT GCAACCGGTC GCGCCGGGCA CGATCGGCAA ACTGGCGGTG
CGCGGCCCAA CCGGCTGCCG CTATCTCGCC GACGAGCGGC AAATGAAGTT CGTGCGCGAC
GGCTGGAACT TGCCAGGCGA TTCCGTCTAT CTCGACGAAG ACGGCTACGT GTTCTACCAG
GCCCGCGCCG ACGACATGAT CGTCTCCGCC GGCTACAACA TCTCCGGGCC CGAAGTGGAG
AGCGTTCTGT TGCAACACGA CGCGGTGTCC GAATGCGGCG TGATCGGCGT GCCGGACGAA
ACCCGCGGGC AAATCGTCAA GGCATTCGTC GTGGTGAATC CCGGATACGA GCGCGACGAC
AAACTTGTCG CGCAACTGCA GGAATTCGTG AAAAATAGCG TGGCGCCGTA TAAATATCCC
CGCGACATCG TTTTTGTCGA TTCATTGCCG CGCACCGAAA CCGGCAAGCT CAAACGTTTC
GAGTTGCGTA CCATGGCATA G
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| Protein sequence | MEPSAHVDTF ARDNLPPQDQ WPVFLLDNPD VAYPARLNCA SELLDRTIDA GHRDDPAIWS
DVDGAPRATT YGELLALVNR SAHVLVDEMG LQPGNRVLLR GPNTLHMAVT ALAALKVGLV
VVPTMPLLRA KELKQIIDKA QVGAALCDAR LTAELARCSD PEDEFYCAGL MQTRLFHDDS
PDSLDTLAVN KPDHFTACDT AADDVCLIAF TSGTTGAPKG CMHFHRDVVA MCDLFPRHVL
KPTSSDIFCG TPPLAFTFGL GGLLCFPLRV GASTVLIEKL TPETLLQTVE RFHATVMFTA
PTFYRQMAPL VAHHDVSSLK KTVSAGEALP DSTRRLWRDA TGIDMIDGIG GTELIHIFIS
AQGDEIRPNA IGRAVPGYAV QAVDDDMQPV APGTIGKLAV RGPTGCRYLA DERQMKFVRD
GWNLPGDSVY LDEDGYVFYQ ARADDMIVSA GYNISGPEVE SVLLQHDAVS ECGVIGVPDE
TRGQIVKAFV VVNPGYERDD KLVAQLQEFV KNSVAPYKYP RDIVFVDSLP RTETGKLKRF
ELRTMA
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