| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7155 |
|---|
| Symbol | |
|---|
| ID | 6279447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3547522 |
|---|
| End bp | 3548640 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618177 |
|---|
| Product | alanine dehydrogenase |
|---|
| Protein accession | YP_001890813 |
|---|
| Protein GI | 187921781 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.301485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CCGTACCAAA GGAAGTCAAA ACGCAGGAGT ACCGGGTTGG TCTGACGCCG
GTGTCGGTCG CCGAACTGGT TCGACATGGC CATAGCGTCG CCGTCGAGAA AAGCGCGGGC
GAAGGATCAG GCATCGCTGA CAGCGACTAC GTCAAAGCGG GTGCAAGCAT TCAGGATTCG
GTCGAGCGTC TGTGGAAGGA GGCGGAGTTG ATCGTCAAGG TCAAGGAACC GCAGGCGATA
GAGCGCGCAC GTTTGTCCCG CGGTCAGATA CTGTTCACCT ACCTGCACCT CGCGGCCGAC
GCCGATCAGA CCGCCGATCT GATCAGGAGC GGCGCGACCT GCATCGCATA CGAAACAGTG
ACCTCGCGTT CAGGCGGTTT GCCTTTGCTG ACGCCCATGT CGGAGGTGGC GGGCCGGTTA
GCGCCACAGG CGGGCGCGCG TTGCCTCGAA AAATCGATGG GCGGCCGCGG TGTACTGCTC
GGCGGTGTGC CCGGTGTGCC GCCGGGAGAA GTGCTGATTC TGGGCGGCGG CGTGTCCGGC
ACGCACGCGG CGACGATTGC GCTCGGCATG GGCGCGAGGG TGACCGTGGT CGACCGGTCC
GCCGATGTTC TGAAGCGTCT GACAGTGCAG TTCGGCAGCG CGATCCAGAC AGTCTTTTCG
GTGCAGGCGC AAGTCGAGGA ACTGCTTGAA CGGGCCGATC TTGTGATCGG ATGCGTGCTG
CTGCCCGGCG CGGCGGCGCC GAAGTTGATC AAGCGGGAGA TGTTGGCGCG CATGAAGCCG
GGTTCGGTGA TTGTCGATGT CGCGATCGAT CAGGGCGGCT GCTGCGAGAC CTCGCGTCCG
ACAACGCACG ACGCGCCTAC GTACGTCGTG GATGGCGTGG TGCACTATTG CGTGGCGAAT
ATGCCGGGCG CGGTCGCGAG AACGTCGACA TTCGCCTTGA ACAACGCCAC GCTGCCGTTC
GTGGTCGACA TCGCGAACAA AGGCTGGAAG CAGTCATTGC TCGACGATGT GTACCTGCGC
CCCGGCTTGA ATGTGCATGA AGGGCGGCTC ACCTGCAAAC CGGTCGGCGA TGCGTTGGGG
ATAGATAGCT GGGAGGTCAG TGAGGTGCTC GCAGCCTGA
|
|---|
| Protein sequence | MKIAVPKEVK TQEYRVGLTP VSVAELVRHG HSVAVEKSAG EGSGIADSDY VKAGASIQDS
VERLWKEAEL IVKVKEPQAI ERARLSRGQI LFTYLHLAAD ADQTADLIRS GATCIAYETV
TSRSGGLPLL TPMSEVAGRL APQAGARCLE KSMGGRGVLL GGVPGVPPGE VLILGGGVSG
THAATIALGM GARVTVVDRS ADVLKRLTVQ FGSAIQTVFS VQAQVEELLE RADLVIGCVL
LPGAAAPKLI KREMLARMKP GSVIVDVAID QGGCCETSRP TTHDAPTYVV DGVVHYCVAN
MPGAVARTST FALNNATLPF VVDIANKGWK QSLLDDVYLR PGLNVHEGRL TCKPVGDALG
IDSWEVSEVL AA
|
|---|
| |