| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7154 |
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| Symbol | |
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| ID | 6279762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3545453 |
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| End bp | 3546892 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642618176 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001890812 |
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| Protein GI | 187921780 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.557352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTG CCTCGCTTGG CCTGATCGAT CCCTTGCTGC GTAACTTGCA GGACCTCAAT
TACCAGACAC CTACGCCGGT GCAGGTCAAG GCGATTCCTG CTGTGCTCAG CGGCAACGAC
GTCATGGCTG CGGCACAGAC CGGCACGGGC AAAACGGCGG GTTTTGCGCT GCCGCTGTTG
CAGCGGCTAG TGCAGCACGG CCCGGAGGTG TCCAGCAACC GCGCGCGTGT TCTGGTGCTG
GTGCCCACGC GTGAACTGGC CGAACAGGTG CTGCAAAGCT TTGTCGCTTA CGGCAAAGGT
CTCGACTTAC GATTTCTGGC CGCCTATGGC GGTGTGAGCA TCAACCCGCA GATGATGAAG
TTGCGCAAAG GCGTGGATGT GCTCGTTGCC ACGCCGGGCC GTTTGCTGGA TCTCAATCGC
CAGAACGCAG TGCAGTTCGA TCAGGTACAA ACGCTGGTGC TGGATGAAGC TGACCGCATG
CTGGATCTGG GCTTTGAGCG TGAACTCAAC GCCGTGTTTG CCGCATTGCC CGCTCAGCGC
CAGACCCTGC TGTTCTCAGC CACGTTTACC GATGATATCC GCACCATGGC GGCGGGCATT
TTGCGCGGCC CGGTCAATAT CAGCGTCAGC CCGCCCAATG CCACGGCCAG CAGGATCAAA
CAGTGGGTGG TGCCGGTGGA TAAAAAGAAC AAGCCCGACC TTTTTATGCA CCTTGTGGCC
GAGAACAATT GGGAGCACGC GCTGGTGTTT GTCAAAACCC GCAACGGCGT GGATTACCTG
GCGGCCATAC TGGATAAAGC GGGCTATTCG GTCGACACGA TCCACGGCGA CAAACCGCAA
CCCGCGCGCT TGCGTGCGCT GGAGCGCTTC AAGACGGGCG AAGTCAGTAT GCTGGTAGCC
ACCGATGTGG CTGCGCGCGG CCTTGATATC GACAACCTGC CGCTGGTGAT CAATGTTGAT
TTGCCGATCG TGGCGCAAGA CTATGTGCAT CGTATTGGCC GCACCGGCCG AGCGGGCGCT
AGCGGCGTAG CGGTGTCGCT TGTGTGTGCC GATGAAGCGC CGCAACTGGC CGCGATTGAA
GCGTTGATCC GGCAAACTCT GCGTCGTGAG GAAGAGCCGG GCTTCGAAGC CGAACACCGC
GTGCCGCAAA CTAGCGCGAC GGGGCAGATC ATCAAGAAGC CTAAGAAGCC TAAGAAGCCC
AAAGTGCCGC AAGCTGCGCC GGGCGCCGTG CAGGCGCTCA GCAAGAAACC GCGCCCGCAA
ATTGACGAAA GCAAGCGCAA GCCTGCGGCG CAAGGCGCTG TGGCCGCGAG TAAAGGCACA
AGCTTGTCCA GCAATAGCCC ATTCGCCATG CAAAAGCCGC GCAGCAAACC CGCCAGCAAG
CCCGCCGCGG GCTCACGTAT GCCGGCTGGC AAACCCGCTG GCGGCCGCGG CAAACGCTAA
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| Protein sequence | MSFASLGLID PLLRNLQDLN YQTPTPVQVK AIPAVLSGND VMAAAQTGTG KTAGFALPLL
QRLVQHGPEV SSNRARVLVL VPTRELAEQV LQSFVAYGKG LDLRFLAAYG GVSINPQMMK
LRKGVDVLVA TPGRLLDLNR QNAVQFDQVQ TLVLDEADRM LDLGFERELN AVFAALPAQR
QTLLFSATFT DDIRTMAAGI LRGPVNISVS PPNATASRIK QWVVPVDKKN KPDLFMHLVA
ENNWEHALVF VKTRNGVDYL AAILDKAGYS VDTIHGDKPQ PARLRALERF KTGEVSMLVA
TDVAARGLDI DNLPLVINVD LPIVAQDYVH RIGRTGRAGA SGVAVSLVCA DEAPQLAAIE
ALIRQTLRRE EEPGFEAEHR VPQTSATGQI IKKPKKPKKP KVPQAAPGAV QALSKKPRPQ
IDESKRKPAA QGAVAASKGT SLSSNSPFAM QKPRSKPASK PAAGSRMPAG KPAGGRGKR
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