Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7148 |
Symbol | |
ID | 6279577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3538535 |
End bp | 3539278 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642618170 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001890806 |
Protein GI | 187921774 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.263147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGC AATCGCTCTC AGGTAAGCCG GACGGTCGCT TGCCCCGCTA CCAGCAACTG CGCGACGACC TTGTGCGCCG TATTGCAGAG GGCGAGTGGT CACCTGAAAA GGCGATCGCC ACGGAGGCTG AGCTTAGTCA GTTCTATAAC GTATCGACCG GAACGCTCCG CAAGGCGATT GATCTGCTGG TGGCCGACGG GGTGCTCACC CGCACTCAGG GAAAGGGGAC CTTTGTCCGG CGCCCGCGAT TCGATTCGTC GCTGTTCCGA TTCTTCCGGT TCAAGTCAGT CGACGGCAAA CCGGTCCGGC CGACGGCGAA GGTGCTCAGG CGCGAAGTCG TCAAGCCGAA CGAAACAATT CGCTCAACTT TGCAGATGAA GGCGACCGAG AAGACTCTTC ATCTGTCGCG AGTGCGGATG ATTGAAGGGG AAGCGGTATT GTCGGAAGAA ATATGGCTTC CTCGGAGCCG TTTCGAAGGG CTGGCGACAC TGCCCCTCGG TGACTTCGAA GACTTGCTGT ATCCGCTCTA CGAGCGGCTC TGCCGGCAAA TCGTGGCGTC CGCCACCGAG ATTCTGAACG TCGAAAAGGC CACGGAAGCT GATGCAGCGC TGTTGCGCAT CGAGGTCGGC AGTCCGGTAA TCCTCGTGCA GCGTGTCGCA TCCGATTTTG CCGGGACACC GATTGAATGG CGCACCACGC GCGGCGCCGC TGAAGCATTC CAGTATCAGG TCGACATTCG CTGA
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Protein sequence | MDMQSLSGKP DGRLPRYQQL RDDLVRRIAE GEWSPEKAIA TEAELSQFYN VSTGTLRKAI DLLVADGVLT RTQGKGTFVR RPRFDSSLFR FFRFKSVDGK PVRPTAKVLR REVVKPNETI RSTLQMKATE KTLHLSRVRM IEGEAVLSEE IWLPRSRFEG LATLPLGDFE DLLYPLYERL CRQIVASATE ILNVEKATEA DAALLRIEVG SPVILVQRVA SDFAGTPIEW RTTRGAAEAF QYQVDIR
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