Gene Bphyt_7148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7148 
Symbol 
ID6279577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3538535 
End bp3539278 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID642618170 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001890806 
Protein GI187921774 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.263147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGC AATCGCTCTC AGGTAAGCCG GACGGTCGCT TGCCCCGCTA CCAGCAACTG 
CGCGACGACC TTGTGCGCCG TATTGCAGAG GGCGAGTGGT CACCTGAAAA GGCGATCGCC
ACGGAGGCTG AGCTTAGTCA GTTCTATAAC GTATCGACCG GAACGCTCCG CAAGGCGATT
GATCTGCTGG TGGCCGACGG GGTGCTCACC CGCACTCAGG GAAAGGGGAC CTTTGTCCGG
CGCCCGCGAT TCGATTCGTC GCTGTTCCGA TTCTTCCGGT TCAAGTCAGT CGACGGCAAA
CCGGTCCGGC CGACGGCGAA GGTGCTCAGG CGCGAAGTCG TCAAGCCGAA CGAAACAATT
CGCTCAACTT TGCAGATGAA GGCGACCGAG AAGACTCTTC ATCTGTCGCG AGTGCGGATG
ATTGAAGGGG AAGCGGTATT GTCGGAAGAA ATATGGCTTC CTCGGAGCCG TTTCGAAGGG
CTGGCGACAC TGCCCCTCGG TGACTTCGAA GACTTGCTGT ATCCGCTCTA CGAGCGGCTC
TGCCGGCAAA TCGTGGCGTC CGCCACCGAG ATTCTGAACG TCGAAAAGGC CACGGAAGCT
GATGCAGCGC TGTTGCGCAT CGAGGTCGGC AGTCCGGTAA TCCTCGTGCA GCGTGTCGCA
TCCGATTTTG CCGGGACACC GATTGAATGG CGCACCACGC GCGGCGCCGC TGAAGCATTC
CAGTATCAGG TCGACATTCG CTGA
 
Protein sequence
MDMQSLSGKP DGRLPRYQQL RDDLVRRIAE GEWSPEKAIA TEAELSQFYN VSTGTLRKAI 
DLLVADGVLT RTQGKGTFVR RPRFDSSLFR FFRFKSVDGK PVRPTAKVLR REVVKPNETI
RSTLQMKATE KTLHLSRVRM IEGEAVLSEE IWLPRSRFEG LATLPLGDFE DLLYPLYERL
CRQIVASATE ILNVEKATEA DAALLRIEVG SPVILVQRVA SDFAGTPIEW RTTRGAAEAF
QYQVDIR