| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7140 |
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| Symbol | |
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| ID | 6280401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3528422 |
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| End bp | 3529816 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618162 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001890798 |
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| Protein GI | 187921766 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.493954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.408969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATA ACCTCTTCCG CGCCACGCAG GATTTTCATC GCTTCGCGCT TGCGTATCGC
GAGCACTATC CCGACGATGT TTTGACGCTT AAGCAACCGC TGTCCGCCGA CCAGGACGTC
ACGGCGGTCG TCGCCGAACT CGCGGCGCGC GGGCAGCATC CCATGTTGAT CTGCGAAAAG
GTCGATGGGA TCGCAACGCC TCTCGTCACG AATTTTTTTG CTTCGCGTAC ACGTATTGGG
CGTCTGTTCG ATGTCGACGC GTCCGGCCTG TTCGACGCAT ATCAACACCG CGCGAATGCG
CCTATCGCAC CCGTGTTCGT ATCGAACGGT CCCGTACTGG ATCAGGTCAT TGAAGGCGAT
GCTGTCGATC TCGCGCAGTT GCCGATGATC CGCCACTTCG ATACTGACCG CGGCCCGTAC
ATCACGAACG CGGTGATCGT CGCCGAAGAT CCGGTCACCG GTGTGGCGAA CCTCAGTTAT
CACCGCTCGA TGCGGCACGC GAAAAACGCC TTGGCCACCA GCCTGCATTC GCGCGGACAC
CTCTGGCGCA TGCTGCAAAC CGCCCAGGCA CGCGGCGACA CGTTGAAAGT CGCGATGGTG
ATCGGCGCGC ATCCGCTGTT CATGCTGGCC GCCGCCGCGC GCGTGCCGTT CGGCACCGAC
GAGCGCGCAA TCGCAGGCGG TCTGTTCGGT GCGCCGCTGC AACTGGTGCG CACGCCGCGC
TACGGCATCG GCGTGCCCGC TTGCGCCGAG TTCGTGCTGG AAGGCACGAT CGATCCTTCA
GCTCACGCCG AAGAAGGCCC GTTCGGTGAA TTCACCGGCT ATTCATCGGA CCGCTCGACG
AACAACGTGC TGCGCGTCGA TACGATGATG CGTCGTCACG ATGCGTGGCT CGTCGATGTG
GTCGGCGGTC CTTACGCAGA ACATTTGACG TTGGCGCGCT TGCCGCGTGA AGCGGAGATG
AGCGAGAAGC TGAAGGCGCG CTTCCCATCC GTCACGGCAT TGCACTATCC CAACTCCGGC
ACACACTTTC ACTGCTACGT CGCGCTGAAT CAAACGCGCG ACGGCGAAGC GCGCCAGATC
ATGCTCGCGC TGCTCGGCTG GGATCCGTAT CTGAAGAACG TCGTGGCGGT GGATAGCGAC
ATCGACATTA CCAACGACTC GCAGGTGCTG TGGGCTATCG CCACGCATTT TCAGCCGCAC
CAGGACGTAT TTATCGTTGA TGGTTTGCCG GGCAGTCCGC TCGATCCATC GTCGTCCGCA
GCGGGCACCA CGTCGCGCAT GGGCATCGAC GCGACGCGCG GTTCGCATTT CGACGGCATC
CGCGCGCGGA TCAGCGAACG TGCCTCGCAA GAGGCCGTCG ACATTCTGTC CCGCGCCGCC
GGAGTACAGC AATGA
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| Protein sequence | MADNLFRATQ DFHRFALAYR EHYPDDVLTL KQPLSADQDV TAVVAELAAR GQHPMLICEK
VDGIATPLVT NFFASRTRIG RLFDVDASGL FDAYQHRANA PIAPVFVSNG PVLDQVIEGD
AVDLAQLPMI RHFDTDRGPY ITNAVIVAED PVTGVANLSY HRSMRHAKNA LATSLHSRGH
LWRMLQTAQA RGDTLKVAMV IGAHPLFMLA AAARVPFGTD ERAIAGGLFG APLQLVRTPR
YGIGVPACAE FVLEGTIDPS AHAEEGPFGE FTGYSSDRST NNVLRVDTMM RRHDAWLVDV
VGGPYAEHLT LARLPREAEM SEKLKARFPS VTALHYPNSG THFHCYVALN QTRDGEARQI
MLALLGWDPY LKNVVAVDSD IDITNDSQVL WAIATHFQPH QDVFIVDGLP GSPLDPSSSA
AGTTSRMGID ATRGSHFDGI RARISERASQ EAVDILSRAA GVQQ
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