Gene Bphyt_7118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7118 
Symbol 
ID6278310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3508703 
End bp3509320 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID642618140 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001890776 
Protein GI187921744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGATG GGTCCGCGGT TCTTGGCGTT TTCTCTGTGT ACGTGGCCGG CGTGGTGATT 
CCCGGGCCGA ACTTCGTTGC CGTCGCGCAC AAGGCTGCAT CGGCGACGCG CGTCGAAGCG
CTCGCGATGG TCGGCGGCAT CGTGCTGGTC AATCTGTTCT GGGCAAGCTG CGCGATTCTA
GGCGTCGGCA TCGTGTTCAC GGCTTTTCCG TGGCTCGCAT TGGCGGTAAA GCTGGCCGGC
GCGGGCTATC TGATCTGGTT CGGCGCACGC CTGATCGTCA ACGCGTCGGC GGGTAAACCG
ACCGCCGGCG TGAATGCCAC GGCGGGCGGC TTTCGGCAAG CGTTCGCGCA AGGCTTCGCG
ACCAACATCG CGAATCCGAA GTCGATGGCG TTCTTCGCCG CCGTGTTCTC GTCCGCCGCG
CCGGCGCATG TCAGCGTCGG CACGTTTGTG GCGATGCTCG GCATGGTGTG CGTGGTCGCA
AGCAGTTGGT ACGGATTCAT CGCGCTGACC TTGTCGCATG AGCGCATTGC GACCGCGTAC
CGGAGCTGCA AGGCGTGGAT CGATCGCGTT TGCGGCGGGT TGATCGTCGC GTTGGGCTTG
CGTCAGTTGA TCCGGTAG
 
Protein sequence
MVDGSAVLGV FSVYVAGVVI PGPNFVAVAH KAASATRVEA LAMVGGIVLV NLFWASCAIL 
GVGIVFTAFP WLALAVKLAG AGYLIWFGAR LIVNASAGKP TAGVNATAGG FRQAFAQGFA
TNIANPKSMA FFAAVFSSAA PAHVSVGTFV AMLGMVCVVA SSWYGFIALT LSHERIATAY
RSCKAWIDRV CGGLIVALGL RQLIR