Gene Bphyt_7107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7107 
Symbol 
ID6280173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3501224 
End bp3501574 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID642618130 
ProductDopa 45-dioxygenase 
Protein accessionYP_001890766 
Protein GI187921734 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.878058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTC GCGACCTCTC CGCCATCACA AGCTGGCACG CCCATGTGTA TTTCGATGCG 
GGCAGCCGCG ACGCCGCATG GACTTTCCGC GAGCAGATTA GCGCCCACTG GGGCGACGCA
CTGCAACTGG GTCGCTTTCA CGAGCGTCTG GTCGGACCGC ATCCCATGTG GTCGTATCAG
CTCGCCTTCA CGCAATCGCA ATTCGCCGAC GTGGTCGGCT GGCTCACGCT CAATCACGGC
GCGCTGGATA TCTTCCTGCA CCCCAATACC GGCGATGCGT TACGCGATCA CCGCGACGCC
GCCGTATGGA TCGGCCATTC GTACGAACTG GTGCTGAGCG CGTTGAATTG A
 
Protein sequence
MTFRDLSAIT SWHAHVYFDA GSRDAAWTFR EQISAHWGDA LQLGRFHERL VGPHPMWSYQ 
LAFTQSQFAD VVGWLTLNHG ALDIFLHPNT GDALRDHRDA AVWIGHSYEL VLSALN