| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7104 |
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| Symbol | |
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| ID | 6280366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3495074 |
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| End bp | 3500014 |
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| Gene Length | 4941 bp |
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| Protein Length | 1646 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618127 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001890763 |
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| Protein GI | 187921731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC GCGTCGAGGA GATCGCGTTG AAACAGCCGG ACCGCTTCAT GTCGGATGCA
CCGCTCGTCG GCTCGGCCGC CCCGTCCTTC CTTGCCGGCG GCGGCGAACT GGGCGCGCTG
ATCCGCGCCT ACGACTGGAC GCAGACAGCG CTCGGCGCGC CCGACACCTG GCCACAAGGT
CTGAAGATCG CGATCCGCAT CATGCTCACG TCGCGTCAGC CGCTGTGGAT CGGCTGGGGC
GACGAGCTGC TCTATTTTTA CAACGATCCG TATAAATCGA TCATCGGCGG CAAGCATCCG
GTCGCGCTTG GTCAACCGAC CCGCGTCGTA TGGCGGGAAA TCTGGACTGA CATCGAGCCG
CTTCTGGATA CAGCGCTGGC GGGCGCCGAA GGCATCTTCG TCGAACAGAA GCTGCTCATC
ATGGAGCGCA ACGGCTTTCC CGAGGAAACG TATTACACCT TCTCGTACAG CCCGATTCCC
GGCGAGGACG GCGAACCGGG CGGGATCATC TGCGCCAACA GCGACAACAC GGCGCAGGTG
GTCGGCGAAC GGCAATTGGC GCTGTTGAAG GAGCTGGCGG CGGTCAGCCC GAACGGCCGC
GACTGGCGCG AGGCGTGCGA ACTCAGCGCG CGCGCGTTGC AGGCGAATCC GCAAGACCTG
CCCTTTGCGC TGCTTTATGC GGCCGAACCC GGCAGCGATA CGGTCACGCT GGTCGGCGCG
TGCGGCATCG AGCCGGGCCA TCCGGCGGCG CCGCAGACGA TGCGCGTCGG TGAATCGCTT
TGGCCGATCG CCGACGTCGT CAAGATCCAG GCGCCGCAGA TGGTGCGCGA CTTGACGCAG
CGTTTCGGCA CCGCGTTGCC GAGGGGACCG TGGCATCTCG CGCCGGAGCA GGCGGTCATC
CTGCCGGTGT CGGCCGGCAG CGAGTCGACG CAGACGGTGC TGCTGATCGC CGGCCTGAAT
CCTTGCCGCC TGGTTGACGA CGCCTACCGC AGCTTCCTGA ACCTGGTCGC CGGCCAGATC
GGCGCGGCGA TCGGCTACGC GCAGGCGTAT GAAGAAGAGC GGCGGCGCGC GGAAGCGCTG
GCCGAAATCG ATCGGGCGAA GACCACGTTC TTCTCCAACA TCAGCCATGA ATTCCGCACG
CCGTTGACGC TGATGCTCGG CCCGCTCGAA GAACTGCTCG CGAGGCCGCA GCCGGGCCCG
AGCGGTAATA ACGCGCAGAC ACGCAGCGAT ATCGACGACC GCGCGCTGAT CGAGATCACG
CATCGTAACG GCTTGCGCTT ACTGAAACTC GTCAACGCAT TGCTGGATTT CTCGCGGATC
GAGGCGGGGC GCATCGAGAT TCACACGCAG CCCACCGACA TCGCGGCCTT CACGGCTGAA
CTCGCGTCGC TGTTCCAGTC CGCGATGGAG GCGGCCGGCC TGCGTCTCGA GGTGGAGATT
CCGGCTACCC CCGTGGTCGT GCAGCTCGAC CGCGAGATGT GGGAAAAGGT GGTGATGAAC
CTGCTGTCGA ACGCGTACAA GTTCACGTTT TTCGGCACGG TCCGGGTCGC GGTTCGCGCG
GTCACAGGCG GCGTCGAGGT CAGCGTGACG GACAGCGGCA TCGGCGTCGC GGAAGAAGAA
GTACCGCGTC TGTTCGAGCG CTTTCATCGC GTGGCGGGCG CACCGGGCCG CTCGGTCGAA
GGCAGCGGCA TCGGGCTCGC GATGGTGCAG GAACTGGTGA AGCTGCATGG CGGCACCGTG
CGGGTCGACA GTGTGCTCGG CGAAGGCGCG TGCTTTACCG TGTCGCTGCC GTCCGGCGCC
GTGCAGTCCG AGCGCGAGGA CGCAGGCGTG CATGCCACCA TGAGCAAGCA CGCGCGCAGC
TATGTCGATG CCGCGTTGCG CTGGAGCCCG GAGAACGAGA TCGTGGACGG CGCGTCGATC
GAAACGGCAT CGGCCGACGA GACGTCGCCC GAGGCTGCGC CGGCCGCCGC CGCGCGGCTG
CTGGTCGTCG ACGACAATGC GGACTTGCGT GAGTATATGA GCCGCATCTT GCGAGCGGCG
GGCCACGACG TGCGGCTCGC GAGCGACGGC CAGGCCGCGC TCGAAGCCGC GCGCGCGGAA
GCGCCCGATC TGGTGCTCTC CGACGTGATG ATGCCGCGCC TCGACGGCTT CGGCCTGCTG
CGGGCGCTGC GCGCCGATCC GCATTTGCGC GACACGCCGG TACTGATGCT GTCGGCCCGC
GCGGGTGAGG AAGCGCGCGT CGACGGTATC GAGCATGGCG CCGACGACTA TCTGACCAAG
CCCTTCTCTG CGCGCGAGCT GCTGGCCCGC GTATCGGGCA ATCTGCAACT CGCGCGCTTG
CGTCGCGAGA CCGAGATGAA GCTGCGCGAG GAATCGCGCA CGCTGGAGAT CCTCAATCGC
GTCGGCTCCA CGGTGGCGGC CGAACTCGAC CTGAACCGCG CGGTGCAGAT CGTGACGGAC
GCGGCTACCG AACTGACCGG CGCCGCGTTC GGCTCGTTCT TCTACAACGT GCTCGACCAG
AAGGGCGGCA GCTACATGCT GTTCACGCTC TCCGGCGTGC AGAAGGAAGC GTTCGAGCGG
TTGCCCATGC CGCGCAACAC GGCGGTGTTC GCGCCCACGT TCCAGGGCGA CGGCATCGTG
CGCGTCGACG ACATCACGCA GGATCCGCGC TATGGCCACA ACGCGCCGCA TCGTGGCATG
CCGGATGGCC ATGTGAAGGT GCGCAGCTAT CTGGCCGCGC CGGTGCAATC GCGTGGCGGC
GAAGTGGTCG GCGGCCTGTT CTTCGGGCAC CCGGAGCCTG GCGTGTTCAC CGAGCGCGCC
GAGCGGATCG TGGCCGGCAT CGCGGCGCAG GCGGCGATTG CCATCGACAA CGCACGCCTG
TATCAGGCGG CGCAAATTGA AATCGCGGAG CGCACCAAGG CGCAAAGCGC GTTGCGCGAT
CTGAACGAAA CGCTGGAGCG CCGCGTGATC GAAACGGTAG CGGACCGCGA CCGTTTGTGG
GAGCTGAGCG AGGATCTGCT GGTCGTGGCC GATATCGAAG GCCGCTTGCA GCGTGTGAGT
CCATCGTGGA GCACGGCGCT CGGTCATAAC GTGCATTGGC TGATGTCGCG TTCCTATGTC
GATCTGGTTC ATCCCGATGA CGTAGAGACG GTCCGCACGC ACCTGGCCGA ACTGCGCAGG
ACGGGCGTGC CGGTGCGTTA CGAAAACCGC TTCAAGCGGA TCGACGGCAC GTGGCGTTGG
GTCGCGTGGA CACTCGCGCT CGATCCCGAT ACCACGCGCA TCCACGGCGT GGGCCGCGAC
GTCACCGCGG ATAAGGAAAC CACCGAGGCG CTGCGGCACG CCGAAGAAGC GCTGCGCATG
GCGCAAAAAA TGGAAGCGAT CGGCAAGCTC ACGGGCGGCG TCGCGCATGA CTTCAACAAC
CTGCTGCAAG TGATCGGCGG CAATCTGCAA CTGCTGGCGA AAGACGTCGC CGGTTCGGAG
AAGCCCGAGC AGCGCGTGCG CAATGCACTG GCTGGTGTGG CGCGCGGTGC GAACCTCGCC
TCGCAACTGC TCGCGTTCGG GCGGCGTCAG CCGCTCGCGC CGAAGGTCGT CAATCTCGGC
CGCTTCGTGC GCGGTCTCGA CGACATGCTC AGACGCGCGC TCGGCGACGG CGTCGAAATC
GAAACGATCG TGTCGGGCGG CTTGTGGAAT ACGCTGGTCG ATCCGTTTCA GGTCGAGAAC
GCGCTGCTGA ATCTGGCGAT CAACGCGCGT GACGCCATGA GCGGCCACGG CAAGCTCACG
ATCGAAGCCG GCAACGCCGC GCTTGACGAC GCCTACGCCA AACGCAACGC GGAGGTCACG
CCGGGCCAGT ACGTGATGCT GGCGGTCACC GACACGGGCG CCGGCATGTC GCCGGAAGTG
CGCGAGCGCG TGTTCGAACC GTTCTTCACG ACCAAGGCCG AAGGCCAGGG CACGGGCCTC
GGCTTGAGCA TGGTGTATGG CTTCGTCAAG CAATCCGGCG GCCATGTGAA GATCTACAGC
GAAGAAGGCC ACGGCACCAC GATCCGCATC TATCTGCCGC GGGTGCGCCA GGAAGAAGAC
CTCGAAACGA ATATCGAAGC CGGTCCCGCC AAGGGCGGCA CGGAAACGAT TCTCGCGGTC
GAAGACGACG AGGAAGTGCG CACGACCGTG GTCGAAATGC TCTCCGATCT CGGCTACCGC
GTGCTGAAAG CGAAAGACGC GCAAAGCGCG CTGGCGATTG TCGAGAGTGG CGTGCCGATC
GACATGCTAT TTACCGATGT GGTGATGCCC GGCCCGTTGC GCAGCACCGA ACTCGCCCGC
AAGGCGCGCG AGCGGTTGCC GGCGATCGCG GTGCTGTTCA CGTCGGGCTA TACGGACAAC
GCGATCGTGC ATTCAGGGCG GCTCGACGAA GGCATCGAAT TGCTCAGCAA GCCGTACACG
CACGAAGCGC TGGCGCGCAA AGTACGCTAC GTGCTGCAAG CGCAGAATCC GCAAGCGGCC
GAAATTGCCG AGGCCGAGCA GCATCTTCTC GAGATCGATC CACCCGTGAC GCCGGATGGC
GCCGATAGTT TCGTCACTCA AACGCGGCTG CGGATTCTGC TGGTGGAAGA CGACGAACTG
ATTCGCGTGA GCACCGCCGA ATTGCTGCGC ACGTTCGACT TCGACATTCT GGAAGCCGAA
GGCGAGCATG ACGCCAAGCA GATTCTCAGC GAACACGCGA TCAGCGTGAT GCTGACCGAC
GTGGGGCTGG CGGGTAAGTC GGGAGTCGAT CTAGCGCTCG ACGTATGTCG CGAGCGGCCT
GATCTGCGCG TGATCTTTCT GACCGGCTAC GACCTCGTGC TGACGCCGGC ACAGCGCGCG
GTCTTGCCGC ACGCGATGCT GATGCGCAAG CCCTACGATC CGCTCGATCT CATCGATGCG
CTGAAAACGC CACTGCGCTA A
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| Protein sequence | MTRRVEEIAL KQPDRFMSDA PLVGSAAPSF LAGGGELGAL IRAYDWTQTA LGAPDTWPQG
LKIAIRIMLT SRQPLWIGWG DELLYFYNDP YKSIIGGKHP VALGQPTRVV WREIWTDIEP
LLDTALAGAE GIFVEQKLLI MERNGFPEET YYTFSYSPIP GEDGEPGGII CANSDNTAQV
VGERQLALLK ELAAVSPNGR DWREACELSA RALQANPQDL PFALLYAAEP GSDTVTLVGA
CGIEPGHPAA PQTMRVGESL WPIADVVKIQ APQMVRDLTQ RFGTALPRGP WHLAPEQAVI
LPVSAGSEST QTVLLIAGLN PCRLVDDAYR SFLNLVAGQI GAAIGYAQAY EEERRRAEAL
AEIDRAKTTF FSNISHEFRT PLTLMLGPLE ELLARPQPGP SGNNAQTRSD IDDRALIEIT
HRNGLRLLKL VNALLDFSRI EAGRIEIHTQ PTDIAAFTAE LASLFQSAME AAGLRLEVEI
PATPVVVQLD REMWEKVVMN LLSNAYKFTF FGTVRVAVRA VTGGVEVSVT DSGIGVAEEE
VPRLFERFHR VAGAPGRSVE GSGIGLAMVQ ELVKLHGGTV RVDSVLGEGA CFTVSLPSGA
VQSEREDAGV HATMSKHARS YVDAALRWSP ENEIVDGASI ETASADETSP EAAPAAAARL
LVVDDNADLR EYMSRILRAA GHDVRLASDG QAALEAARAE APDLVLSDVM MPRLDGFGLL
RALRADPHLR DTPVLMLSAR AGEEARVDGI EHGADDYLTK PFSARELLAR VSGNLQLARL
RRETEMKLRE ESRTLEILNR VGSTVAAELD LNRAVQIVTD AATELTGAAF GSFFYNVLDQ
KGGSYMLFTL SGVQKEAFER LPMPRNTAVF APTFQGDGIV RVDDITQDPR YGHNAPHRGM
PDGHVKVRSY LAAPVQSRGG EVVGGLFFGH PEPGVFTERA ERIVAGIAAQ AAIAIDNARL
YQAAQIEIAE RTKAQSALRD LNETLERRVI ETVADRDRLW ELSEDLLVVA DIEGRLQRVS
PSWSTALGHN VHWLMSRSYV DLVHPDDVET VRTHLAELRR TGVPVRYENR FKRIDGTWRW
VAWTLALDPD TTRIHGVGRD VTADKETTEA LRHAEEALRM AQKMEAIGKL TGGVAHDFNN
LLQVIGGNLQ LLAKDVAGSE KPEQRVRNAL AGVARGANLA SQLLAFGRRQ PLAPKVVNLG
RFVRGLDDML RRALGDGVEI ETIVSGGLWN TLVDPFQVEN ALLNLAINAR DAMSGHGKLT
IEAGNAALDD AYAKRNAEVT PGQYVMLAVT DTGAGMSPEV RERVFEPFFT TKAEGQGTGL
GLSMVYGFVK QSGGHVKIYS EEGHGTTIRI YLPRVRQEED LETNIEAGPA KGGTETILAV
EDDEEVRTTV VEMLSDLGYR VLKAKDAQSA LAIVESGVPI DMLFTDVVMP GPLRSTELAR
KARERLPAIA VLFTSGYTDN AIVHSGRLDE GIELLSKPYT HEALARKVRY VLQAQNPQAA
EIAEAEQHLL EIDPPVTPDG ADSFVTQTRL RILLVEDDEL IRVSTAELLR TFDFDILEAE
GEHDAKQILS EHAISVMLTD VGLAGKSGVD LALDVCRERP DLRVIFLTGY DLVLTPAQRA
VLPHAMLMRK PYDPLDLIDA LKTPLR
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