| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7094 |
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| Symbol | |
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| ID | 6280072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3478623 |
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| End bp | 3480776 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618117 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001890753 |
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| Protein GI | 187921721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAA ATAGCCGTCG CCGTTTCCTG CAGACCGTGG CTTCATCCGC CGGCGCTGCT
GCCGCGCTGA CCGCGCTGCC CGAGTCGATT CGCAATGCGC TCGCCGTTCC CGCGTTTTCG
CGCACCGGCA CGATTCGCGA TGTCGAGCAC ATCGTCGTGT TCATGCAGGA GAACCGCTCG
TTCGACCACT ACTTCGGCCA CATGCGCGGC GTGCGTGGCT ACAACGACCG CTTCCCGATT
CCGCTGCCGA ACGGCAAGCC GGTGTGGTAC CAACCGTCGA AGGAAGATCC GACCCAGCCG
GTCCTGCCGT TCCATCTGAA CACGGCGACC ACCAGTGCGC AATGCGTCGG CGATCTGGAT
CACTCCTGGT ACAAGACCCA CGCCGCAATC GACGGCGGCC GCTACGACCA GTGGCCCGCC
AACAAGACCG ACATGACGAT GGGCTATCAC CTGCGCAGCG ACATTCCGTT CCACTACGCG
CTGGCCGATG CATTCACCGT CTGCGACGCC TACTTCTGCT CGCTGCCGGG ACCGACGCAC
CCGAACCGCT CGTATCTGAT GACCGGCATG GTCGATCCGA GCGGCACGCT GGGCGGACCG
CTCCTCGACA ACAACGATTT CGTCGACGGC GACGGTCCGC CGAATTATCA GTTGCTCTCG
TGGACCACGT ACCCGGAGCG TCTGCAAAAC GCGGGCATTT CGTGGCAGGT GTACCAGCAG
GGCCTGACCG GCGCCGATCC GTTGAACGGC AACTACGGCA CCAACATCCT GCAGAACTTC
ACGAACTTCA TCAACGCGCA GCCGGGTTCG CCGTTGTACG AGCGTGCGCA AACCGTGCGC
ACCATCGACG ACCTGAAGGC CGATGTGCTC GCCAACAAGC TGCCGCAAGT GTCGTGGCTG
TGTCCGCCGG CCGCGTACTC GGAACACCCG AGCTATACGC CCGCATACGG CGCGGAGTAC
ACCTCACAGA TTCTGGATGC GTTGACGTCG AATCCCGAAG TGTGGAGCAA GACCGTGCTG
TTCATCATGT ACGACGAGAA CGACGGCTTC TTCGATCACC TCGTGCCGCC GCAACCGGCG
ACGACCGGCG CGCAAGGCAA GTCGACGGTC AGCACCGAAG GCGAAATTCA CAACGTGGTG
AATCCGGCGC GCGGCGGCAG CTACACCGCC GACGGCCTGC CGTATGGCCT CGGCCCGCGC
GTGCCGATGA CGATCGTGTC GCCGTGGAGC AAGGGCGGCT TTGTCTGCTC GCAGGTGTTC
GATCACACGT CGGTGATTCG CTTCATTGAA GCACGCTTTG GCGTGTACGA GCCGAACATC
ACGGCATGGC GCCGCGCGGT GTGCGGCGAC CTGACCACGG CTTTCGACTT CCGCACGCCG
GATTCGAAAG TGCCGCCGCT GCCGGACACG AGCAACTACA AGAGCATCGC CGATAACCAA
TGCGCCACGC AGCCAAAGCC GACTGTTCCC GCGACGCCGG GCGCCATCGA TCCGCAGGAA
AGCGGCATTC GTTTCGCGCG CGCGCTGCCG TATGAGTTGC ATGTGAACGG CCAGGCCAAC
GAGAAGAAAA ATACGTTCGA GATCGCGATC GGCAACACCG GCGACCAGGG CGCACATTTC
TACATGTACG CGACGAATCG CACGGATGGT CCGTGGCGTT ACACCGTTGA AGCCGGCAAG
TCGATCAACG AGACTTTCGA TCTCACGATG ACCAACGGCG TGTACAGCTT CGAAGTGTTC
GGGCCGAACG GTTTCGTGCG CAAGTTCGCC GGCAACACGC AGCAGGCGAC AGCGCAGAAC
GCGCAGATCG CAGCAGGCCA CGGCAAGAAC AAAGCGTCCG AGCCGGAAGT GAAGGTGCAA
TACGACGCCG CGAACGGCAA CGTGTTCCTG AAGTTCAGCA ACAAGGGCAG CGGCATTGCG
CGCTTGACCG TGACGGACAA CGCGTACGGT GCGCGTCCGC GTCCGGTGCT GGTGCCGGCG
GGCGCGCATA TCGAAGAAGC GTGGGTGCTG GCGTCGAGCC ATCACTGGTA CGACTTGACG
GTGACGAGTA ATGACGACGC AAGCTTCTCG CGCCGTGTTG CGGGTCACGT CGAGAACGGG
CGGCCGAGCA TTAGCGATCC AGCGGCGGTG GCGCCGGTGT TGGTGGTGAA TTAA
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| Protein sequence | MTSNSRRRFL QTVASSAGAA AALTALPESI RNALAVPAFS RTGTIRDVEH IVVFMQENRS
FDHYFGHMRG VRGYNDRFPI PLPNGKPVWY QPSKEDPTQP VLPFHLNTAT TSAQCVGDLD
HSWYKTHAAI DGGRYDQWPA NKTDMTMGYH LRSDIPFHYA LADAFTVCDA YFCSLPGPTH
PNRSYLMTGM VDPSGTLGGP LLDNNDFVDG DGPPNYQLLS WTTYPERLQN AGISWQVYQQ
GLTGADPLNG NYGTNILQNF TNFINAQPGS PLYERAQTVR TIDDLKADVL ANKLPQVSWL
CPPAAYSEHP SYTPAYGAEY TSQILDALTS NPEVWSKTVL FIMYDENDGF FDHLVPPQPA
TTGAQGKSTV STEGEIHNVV NPARGGSYTA DGLPYGLGPR VPMTIVSPWS KGGFVCSQVF
DHTSVIRFIE ARFGVYEPNI TAWRRAVCGD LTTAFDFRTP DSKVPPLPDT SNYKSIADNQ
CATQPKPTVP ATPGAIDPQE SGIRFARALP YELHVNGQAN EKKNTFEIAI GNTGDQGAHF
YMYATNRTDG PWRYTVEAGK SINETFDLTM TNGVYSFEVF GPNGFVRKFA GNTQQATAQN
AQIAAGHGKN KASEPEVKVQ YDAANGNVFL KFSNKGSGIA RLTVTDNAYG ARPRPVLVPA
GAHIEEAWVL ASSHHWYDLT VTSNDDASFS RRVAGHVENG RPSISDPAAV APVLVVN
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