| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7091 |
|---|
| Symbol | |
|---|
| ID | 6278749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3476246 |
|---|
| End bp | 3477037 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642618114 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_001890750 |
|---|
| Protein GI | 187921718 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC CGCTGACAAT CCTGGGTGCT GCATTGAGCA CCGCGTTGAG CGCCGCGCTG
GCGTTCAGCA CCAGCGCGTT CGCCGTCGAG CCCACCACGC TGCGCCTCGG TATCGACCCG
AGCTATCCAC CGATGGACGC CAAGGCGCCC GACGGCAGTT TCAAAGGTTT CGACGTCGAT
CTCGGCAACG AAATCTGCAA GCGCATCCAC GCGCGCTGCC AGTGGGTTGA ACTCGAATTC
TCCGGGATGA TTCCGGCGCT GCAGGCGCGC AAGATCGACG CGATCCTTTC GTCGATGGCG
ATCACGGAGA AGCGCGAGCA GCAGATTCTG TTTTCGTCGA AGCTCTTCCA GTTCAAATCG
CGGCTGATCG CGCGGCAAGG TTCGGCGCTC GCGGGCGGCA CGAACGCACT GGCCGGCAAG
CAGATCGGTG TGCAGTCGGG CACGCAGTTC GAGGGCTATG CGCTGAAGAA CTGGGCGCCG
CTCGGCGCGC ATGTGGTGGC GTACAAGAGT CAGGACGAAG TGTTCGCCGA CTTGCAGAAC
GGGCGCCTGG ACGGCGCATT GCTCGGCTCC GTGGAAGCGG ACATCGGTTT CCTGCGCACG
CCGGCGGGGA AGGGTTTTGC GTTTGTCGGC GAACCGCTTT CAATGGGCGA TCGCGGCGTG
GGCATCGGCT TGCGCAAGGA TGAAACGGCG GTGCAGGCCT CCATCAACGC GGCAATCGCC
TCAATGCTCA AGGACGGCAC GTACGCTCAG ATCGCGAAGA AGTACTTCGA CTTCGATCCG
TACGGCAATT GA
|
|---|
| Protein sequence | MKIPLTILGA ALSTALSAAL AFSTSAFAVE PTTLRLGIDP SYPPMDAKAP DGSFKGFDVD
LGNEICKRIH ARCQWVELEF SGMIPALQAR KIDAILSSMA ITEKREQQIL FSSKLFQFKS
RLIARQGSAL AGGTNALAGK QIGVQSGTQF EGYALKNWAP LGAHVVAYKS QDEVFADLQN
GRLDGALLGS VEADIGFLRT PAGKGFAFVG EPLSMGDRGV GIGLRKDETA VQASINAAIA
SMLKDGTYAQ IAKKYFDFDP YGN
|
|---|
| |