| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7089 |
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| Symbol | |
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| ID | 6277930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3473937 |
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| End bp | 3475178 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618112 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001890748 |
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| Protein GI | 187921716 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCA ATCCGCAACA ACTCGTCGAA CTCGCTCACG AGCACGGCAC GCCGCTGTGG
GTCTACGACG CAGACACAAT CCGCCGGCGC ATTGCCGAAT TGCGCAGCTT CGACGTGATT
CGCTATGCGC AGAAGGCCTG TTCGAATCTG CATATCCTCA AACTGATGCG CGACGAAGGG
GCGATGGTCG ACGCGGTCTC TCTGGGCGAA ATCAAACGCA GTCTAGCGGC GGGCTTCAAG
CCGGACGGCG ATCCAGAAGG CGTCGTGTTC ACCGCCGATC TGATCGATCA CGCGACGCTC
GCCACCGTGA TCGAGCATCG CATCACGGTC AATGCCGGAT CGCTCGATAT GCTCGAACAG
ATAGGACGGC ATGCGCCCGA AGGTCATCGC GTGTGGCTGC GGATCAATCC GGGCTTCGGG
CATGGGCATA GCAACAAGAC CAACACGGGC GGCGAGCATA GCAAGCACGG CATCTGGCTC
GACGATGTGC CGCGAGCGGT CGAGCTGGTC CGGCGTTATC GCCTCAAGCT GGTCGGGTTG
CACATGCATA TCGGTTCGGG CGTCGACTAT GGACATCTGT CGCGTGTCTG CGAGGCGATG
GTCGAAGCCG TGAAGGGCCT GGGCCACGAT ATCGAAGCGA TTTCCGCCGG CGGTGGCTTG
TCGGTGCCGT ATCGCGAAGG CGAGCCCGAT ATCGATGTCG CGCATTACTT CCGCCTCTGG
GATGCGGCGC GCCGGCAGAT CGAAACGCAT GTCGGGCATC GCGTGAGGCT GGAAATCGAG
CCGGGGCGCT TTCTGGTCGC GCAATCAGGC GTGCTCGTCG CCGAAGTTCA CGCGTTGAAT
CGACGTCCCG CGCAGCAGTT TGCTTTGCTC GATGCCGGAT TCAACGACCT CGTGCGGCCG
TCTTTTTACG GCAGTCATCA TGAGATGACG GTGTTGAGGC GCGACGGCGC GTTAAGCGAA
GCGCCAATCG ATTCATTCGC GGTGGCCGGG CCGCTCTGCG AAGCCGGCGA TGTCTTCACG
CAAGCCGAAA GCGGCGTCAT CACGAACCGC TCAATACACA CGCCTGAAGT GGGCGACTTC
ATCGTGTTTC ACGATGCAGG CGCGTATGGC GCGTCGATGT CCTCGAACTA CAACAGCCGC
CCGCTTGCGC CCGAGGTGTT GCTCGATCAT GGCAAGCCGC GGTTGATCCG CCGGCGCCAG
ACTATCGACG AGTTGCTCGC GCTCGAAGAA ACGGCGGCCT GA
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| Protein sequence | MPFNPQQLVE LAHEHGTPLW VYDADTIRRR IAELRSFDVI RYAQKACSNL HILKLMRDEG
AMVDAVSLGE IKRSLAAGFK PDGDPEGVVF TADLIDHATL ATVIEHRITV NAGSLDMLEQ
IGRHAPEGHR VWLRINPGFG HGHSNKTNTG GEHSKHGIWL DDVPRAVELV RRYRLKLVGL
HMHIGSGVDY GHLSRVCEAM VEAVKGLGHD IEAISAGGGL SVPYREGEPD IDVAHYFRLW
DAARRQIETH VGHRVRLEIE PGRFLVAQSG VLVAEVHALN RRPAQQFALL DAGFNDLVRP
SFYGSHHEMT VLRRDGALSE APIDSFAVAG PLCEAGDVFT QAESGVITNR SIHTPEVGDF
IVFHDAGAYG ASMSSNYNSR PLAPEVLLDH GKPRLIRRRQ TIDELLALEE TAA
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