| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7088 |
|---|
| Symbol | |
|---|
| ID | 6279678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3472890 |
|---|
| End bp | 3473819 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618111 |
|---|
| Product | DNA-binding transcriptional regulator LysR |
|---|
| Protein accession | YP_001890747 |
|---|
| Protein GI | 187921715 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA CGCATCGGCA TATCGAAGTC TTCCGCGCAT TGATGACCGC GGGCAGCGTC
ACCAAAGCGG CCGAACTGCT GTTCACCTCG CAGCCCACGG TCAGCCGCGA ACTGGCGCGC
ATGGAGCAGA GCATCGGCTT TGCCCTGTTC GAACGCACGA ATGGCCGGCT GCGTCCCACG
CTGTCCGCGC TCATCTTGTT CGACGAGATC AAGCGCGCGT ATGTCGGGCT CGAACGCGTG
GCGTCTACCG CCGCGAGTCT GCGCGAATTC CAGGGCGGCC AGCTTTCCGT CATCGCGTTA
CCCGCGTTTT CACATTCGAT CTTGCCGGGC GCGGCGAAGC GCTTTCACGA CTCGCAACCG
GGCGCGAGTC TGTCGATCGC GACGCAGGAG TCGCCGTTTC TGGAGGAATG GCTGACCGCC
CAGCGCTACG ACCTCGGCCT CGCCGAACAC GGCGCACCGC CGGCGGGTAC GCGTCTGACG
CCGTTGCTCG AAGTGGATGA AGTGTGCGTG CTGCCCGACG GCCATCCATT GCTCGGCAAG
CGTGTGATCG CACTGAAGGA TTTCGCCAAT CAACCGTTCA TCAGCCTGTC GTCGAACGAT
CCATACCGCA TTCAGATCGA CGAGACCTTC GCGCAAGCGG GAATCGCGCG CCGCCAGATC
GTCGAAACGC CTACCGCGGT GTCCGTGTGC AGCTTCGTAC GGCAAGGGCT TGGCCTCGCG
ATCGTCAATC CGCTGACAGC GCTCGATTTC GTGGGACGCC ATCTGCATAT CCGGCCGCTC
GCCGTATCGC TGCCGTTTCG CGTGAGTGTG ATTCAACCGG AGCATCGTCC GGGGCACCCG
CTGGCTGGCG AGTTCGTTGG AGCGCTGCAA AGCGAAGCCG CCGCGCTGCG GCTACAATTG
AAATCCCACA CCGGACGCAA GCAGCAGTGA
|
|---|
| Protein sequence | MALTHRHIEV FRALMTAGSV TKAAELLFTS QPTVSRELAR MEQSIGFALF ERTNGRLRPT
LSALILFDEI KRAYVGLERV ASTAASLREF QGGQLSVIAL PAFSHSILPG AAKRFHDSQP
GASLSIATQE SPFLEEWLTA QRYDLGLAEH GAPPAGTRLT PLLEVDEVCV LPDGHPLLGK
RVIALKDFAN QPFISLSSND PYRIQIDETF AQAGIARRQI VETPTAVSVC SFVRQGLGLA
IVNPLTALDF VGRHLHIRPL AVSLPFRVSV IQPEHRPGHP LAGEFVGALQ SEAAALRLQL
KSHTGRKQQ
|
|---|
| |