| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7057 |
|---|
| Symbol | |
|---|
| ID | 6278314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3438690 |
|---|
| End bp | 3439004 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642618080 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_001890716 |
|---|
| Protein GI | 187921684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.250016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.403256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC AATGGCGCTG CGCCGGCCAT GCCGGCGACC TGTCCGATGA CGCGCCGCTC
GAGTTCAAGC TCGACGGCAC CGAGATCGGC ATCTACAAGG TGGGCGATGC GCTGTATGCG
CTGGAAAACG TCTGCCCCCA TGCGTACGCG TTGCTGACGC AGGGCTTTGT CGACGGCGAC
ACCGTCGAGT GCCCGTTGCA CGAAGCCGTG TTCCATATCC CGACCGGCAA ATGCTTGAAA
GAGCCCGGTG GCCGCGACCT GAAGGTGTAC TCGGTGCGCC TCGCCGGTGA AGAAATCCAG
ATCAAGGTGG AATGA
|
|---|
| Protein sequence | MTEQWRCAGH AGDLSDDAPL EFKLDGTEIG IYKVGDALYA LENVCPHAYA LLTQGFVDGD
TVECPLHEAV FHIPTGKCLK EPGGRDLKVY SVRLAGEEIQ IKVE
|
|---|
| |