| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7056 |
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| Symbol | |
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| ID | 6277741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3437175 |
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| End bp | 3438248 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642618079 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890715 |
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| Protein GI | 187921683 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.236319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.38539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCACA TCATTGCGGC CGGCTTGACG GCAATCTGCG CAACGACAGG CGCATGGGCG
CAGAGCAGTG TGACGCTATA CGGCAGCCTG GATGCCGGTG TCGCGTATAT CAGCAATGTC
GGCGGCCATT CGAAGTGGAT GGAAGAACAG GGCAACATGC AGCCTGACCG CTGGGGCCTG
AAGGGCGTGG AAGATTTGGG CGGCGGCCTG AAGACGATTT TCCAGTTGGA AAACGGCTTT
TATACCAACA CAGGCGCATT CGCTAAAGCC GGTGTGCTGT TCAATCGCCA GGCGTTTGTC
GGTCTGAGTT CAGACTCGAT AGGAACGGTG ACCCTCGGTC ATCAGACTCC GTTCAGCTTC
GACGTGTTGG GTCCGCTGAG CACGGCTTAT CTGGCGGCGA GCTGGTATGC GTTCCACCCG
GGCAATATCG ACGAACTCGC CGATACGGGC GTGGTGCCGT TCGACAATTC GGTGAAATTC
CGCTCGGCGA GTTTCAGCGG CTTTCAGGTC GGCGCGATGA TGGGTCTCGG CAACACGACC
AACTTCTCGA CCGGCAAGAC ACTGAGCTTT GCGCTTAGCT ATGCGAACGG TCCGTTCAAG
GCCGGTGCGA CGTACGCGAA CGAGCACGAC CGCACGCCGT CGATCGTCAC GACGGGCATC
ACCAACTTCC AGGGCGTGGC CGCTGCCACC TATACCGCGG ACAAGGTCGA GAACATGGGC
GCGGGCGCCT CGTATCAGTT CGGCAAGCTG CTGGTGCACG GTTTGTACAC GCGCGTGAAG
CTCGAGTCGG GTTCTCACTC GAACACCTAT CAGAGCTACG ACGTCGGCGC GAATTACCAG
TTCACGCCGT TTAACACCGT GGCCGGTGGC GCCGCGACGA CGACGCTGGC GGGGCATCGC
TGGACGCAGT TCGAAATCGG CGATATCTAC GCGCTGTCGA AGTCGACGCA GTTGTATGTG
AACGCGCTGT ATGAACGCGC CGGTTCGAAC ACGGATGCGG CGTTCTTCAC AGCAGGTGTG
TCGAGTGGAC GGAACCAGAC GATCATTCTG ACTGGCATCC ATCACTCGTT CTGA
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| Protein sequence | MKHIIAAGLT AICATTGAWA QSSVTLYGSL DAGVAYISNV GGHSKWMEEQ GNMQPDRWGL
KGVEDLGGGL KTIFQLENGF YTNTGAFAKA GVLFNRQAFV GLSSDSIGTV TLGHQTPFSF
DVLGPLSTAY LAASWYAFHP GNIDELADTG VVPFDNSVKF RSASFSGFQV GAMMGLGNTT
NFSTGKTLSF ALSYANGPFK AGATYANEHD RTPSIVTTGI TNFQGVAAAT YTADKVENMG
AGASYQFGKL LVHGLYTRVK LESGSHSNTY QSYDVGANYQ FTPFNTVAGG AATTTLAGHR
WTQFEIGDIY ALSKSTQLYV NALYERAGSN TDAAFFTAGV SSGRNQTIIL TGIHHSF
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