Gene Bphyt_7044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7044 
Symbol 
ID6278110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3426564 
End bp3427103 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID642618067 
Productprotein of unknown function DUF962 
Protein accessionYP_001890703 
Protein GI187921671 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.99733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.010164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGC TGACGCAACA GCTTACGCAA TACGCGGCCT ACCATCGTGA CCGGCGCAAT 
ATCGCCACGC ATTTCATCGG CATTCCGATG ATCGTGCTGG CGCTGGCGGT GTTGTTGAGC
CGGCCTGCTT TCGCTGTCGG CGCCTGGCCG CTGACGCTGT CGCCGGCGTG GGCGTTGTTC
GTCGCGGCCA CGCTGTATTA CCTCGTGCTC GACGTGCCGC TCGGCGTGAT GATGACCTTC
GTGTCCGCGC TCTGCGTCGC GTTCGGCCAG TGGACGGCCA CACAGTCGAC GTTCGCGTGG
CTCGCGATCG GTGTAGGGCT CTTTCTGGTG GGCTGGGTGT TTCAGTTCGT TGGACACGTG
GCCTACGAAC ATCGCAAGCC TGCCTTTGTG GATGATGTGA TCGGCCTGCT GATCGGACCG
CTGTTCGTGC TGGCCGAAGC GTTGTTCGGC TTCGGCTGGC GGCCCGCGCT GCGCGCAGCG
ATCGAGGCGC AGGTCGGTCC GACGCGTATT AATGCGGCCC ATACGGCGGC GCATCGCTGA
 
Protein sequence
MRTLTQQLTQ YAAYHRDRRN IATHFIGIPM IVLALAVLLS RPAFAVGAWP LTLSPAWALF 
VAATLYYLVL DVPLGVMMTF VSALCVAFGQ WTATQSTFAW LAIGVGLFLV GWVFQFVGHV
AYEHRKPAFV DDVIGLLIGP LFVLAEALFG FGWRPALRAA IEAQVGPTRI NAAHTAAHR