| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7043 |
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| Symbol | |
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| ID | 6278109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3425628 |
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| End bp | 3426524 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642618066 |
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| Product | RarD protein, DMT superfamily transporter |
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| Protein accession | YP_001890702 |
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| Protein GI | 187921670 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.497948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0116084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT ATGACCTAAG GCGCGGGATC GCGCTGTCGG TGTGCGCGAC CACGACGTTT
GCATTACTGT CCGCTTACGC AACCCTGCTC GCGCCGCTAA GCGGCCTCGA CATTTTCGCG
TGGCGCGTTA TCTGGACTGT GCCGGGAGCA TTGTTGCTGG TGGCGTTGAG AAAGCGCCTG
CCCATTCTGC GGCGGCTTCT TTACCGCATG GTGACCGAGC CGAAACTCGG CATGGCGATG
ATCGTGAGCG CGGCGTTGCT TGGCGTGCAA CTGTGGGTGT TTCTGTGGGC GCCGCTACAT
GGCCGGATGC TCGAAGTCTC GCTCGGCTAT TTCCTGATGC CGCTGACGAT GGTATTAGTC
GGGCGCTTTT ATTATCACGA GCGTCTGGAC GGTTTGCAGT GGCTGGCTGT TGCGTGCGCG
GCGACGGGCG TCGGCCATGA ATTGTGGGTG ACGGGCGCAT TTTCGTGGCC GACTTTGCTG
GTCTCGCTCG GCTATCCGCC GTATTTCGTT TTGCGTCGCA AGATCAATCA CGACTCGCTC
GCGATGTTCA CTGTGGAAAT GGCGTTGCTG TTGCCGCCGG CCATTGCGCT GGTTTTCAAC
GGCGGCTCGC TGGCGATGAT CGCCGGCCAT CCCGGCCGCT GGTGGCTACT GTTGCCGGGT
CTCGGTGCGC TGAGCACCAT CGCGCTCGCG TCGTATCTCA AGGCGAGCCG GTTGTTGCCG
GTCGCGTTGT TCGGCATTCT CGGCTACGTC GAGCCGGTGT TGCTGGTACT GATCTCGATC
ACTGTGCTCG GCGAAACGCT GAGCGTCTCA CAGCTGGCGA CCTACGTTCC CATCTGGATC
GCGGTCGCGC TGACGGCATT GCATAGCGTG CGCCTCGTTC GACTCGCACC GAGCTGA
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| Protein sequence | MNQYDLRRGI ALSVCATTTF ALLSAYATLL APLSGLDIFA WRVIWTVPGA LLLVALRKRL
PILRRLLYRM VTEPKLGMAM IVSAALLGVQ LWVFLWAPLH GRMLEVSLGY FLMPLTMVLV
GRFYYHERLD GLQWLAVACA ATGVGHELWV TGAFSWPTLL VSLGYPPYFV LRRKINHDSL
AMFTVEMALL LPPAIALVFN GGSLAMIAGH PGRWWLLLPG LGALSTIALA SYLKASRLLP
VALFGILGYV EPVLLVLISI TVLGETLSVS QLATYVPIWI AVALTALHSV RLVRLAPS
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