Gene Bphyt_7004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7004 
Symbol 
ID6280453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3381848 
End bp3383047 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID642618027 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001890663 
Protein GI187921631 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACC TTTATCTCGC CCATCTGCGC GGCACACTCG AGCAGATTCG CGCTGACGGC 
TTTTACAAGA GCGAGCGCGT GATCGCCAGC CCGCAATCGG CCGACATTCG TCTGGCTAAC
GGCACGGACG TGCTGAATTT CTGCGCGAAC AATTACCTCG GCCTCGCCGA CGACGCGCGG
CTGATCGACG CCGCCAAGCA AGGGCTCGAC AACGACGGCT TCGGCATGGC GTCCGTGCGT
TTCATCTGCG GCACGCAAAC CGTGCATAAA GATCTCGAGC GCGCGCTCGC CGCGTTTTTG
CAAACCGACG ATTGCATCCT CTACTCGAGC TGCTTCGACG CAAACGGCGG CTTGTTCGAA
ACTTTGCTCG ACGAAAACGA CGCAATCATC AGTGACGAAC TGAACCACGC GAGCATCATC
GACGGCGTGC GGCTTTCCAA GGCGAAGCGC TTTCGCTACA AGAACAACGA CCTCGCCGAC
CTCGAAGCCA AACTGATCGA AGCGAAGGCC GCCGGCGCGC GCTTCACACT GATCGCGACA
GACGGCGTGT TCTCCATGGA CGGCATCATC GCCAATCTCG CCGGCATCTG CGATCTGGCC
GACCGTTACG GCGCGCTCGT GATGGTCGAC GATTCGCACG CAGTGGGTTT TGTCGGCGAA
CATGGGCGCG GCACGCCGGA ACATTGTGGC GTGCTGTCGC GTGTCGACAT CATTACGGGC
ACGCTGGGTA AAGCATTGGG CGGCGCATCG GGCGGCTATG TGGCCGCGCG CAAGGAAATC
GTTGAGTTGC TGCGTCAACG CTCGCGTCCC TATCTGTTCT CGAACACGCT GACGCCGAGC
ATTGCCGCCG CTTCGCTGAA AGTACTTGAA CTGCTGGCAA GCGATGAAGG CGCGCAACTG
CGCGCACGTG TGCGCGAAAA CGGCGCGCAC TTCCGCAGCA AGATGAGCGC GCTCGGCTTC
ACGCTCGTGC CCGGCGAACA TCCGATCATT CCGGTCATGC TCGGCGACGC GCAACTCGCC
TCGAAAATGG CAGACGCCCT GTTGAAAGAA GGCGTGTACG TGATCGGCTT CTCGTTCCCG
GTGGTGCCAA AAGGCCGCGC GCGCATTCGC ACGCAGATGA GCGCCGCCCA TACGCCCGAG
CAGATCGACC GCGCGGTGGA TGCATTCGCG CGCGTCGGCC GCGAACTCGG CGTTATTTAA
 
Protein sequence
MRDLYLAHLR GTLEQIRADG FYKSERVIAS PQSADIRLAN GTDVLNFCAN NYLGLADDAR 
LIDAAKQGLD NDGFGMASVR FICGTQTVHK DLERALAAFL QTDDCILYSS CFDANGGLFE
TLLDENDAII SDELNHASII DGVRLSKAKR FRYKNNDLAD LEAKLIEAKA AGARFTLIAT
DGVFSMDGII ANLAGICDLA DRYGALVMVD DSHAVGFVGE HGRGTPEHCG VLSRVDIITG
TLGKALGGAS GGYVAARKEI VELLRQRSRP YLFSNTLTPS IAAASLKVLE LLASDEGAQL
RARVRENGAH FRSKMSALGF TLVPGEHPII PVMLGDAQLA SKMADALLKE GVYVIGFSFP
VVPKGRARIR TQMSAAHTPE QIDRAVDAFA RVGRELGVI