| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7003 |
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| Symbol | tdh |
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| ID | 6280452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3380803 |
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| End bp | 3381834 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642618026 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001890662 |
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| Protein GI | 187921630 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TGGCAAAACT CGAACGCGCT CCCGGGCTCA CGCTTACGGA CGTCAAGAAA
CCTGAAGTCG GCCACAACGA CGTGATGATC CGCATCACGC GCACCGCGAT TTGCGGCACC
GATATTCACA TCTGGAAGTG GGACGACTGG GCGCAAAAAA CGATTCCTGT GCCGATGCAC
GTCGGTCACG AATACGTGGG CGAAATCGTC GAAATGGGCC AGGAAGTGCG CGGCTTTGCG
ATCGGCGATC GCGTGTCGGG CGAAGGACAC ATCACCTGCG GTTTCTGCCG CAATTGCCGC
GCGGGCCGCC GGCATTTGTG CCGCAATACG GTGGGCGTCG GCGTGAATCG CGAAGGCGCG
TTTGCCGAGT ATCTGGTGAT TCCGGCCTTC AACGCCTTCA AGATTCCTCC CGAGATTTCC
GACGATCTCG CTGCAATTTT CGATCCGTTC GGCAACGCCA CGCACACTGC GCTGTCGTTC
AATCTGGTCG GCGAGGACGT GCTGATTACC GGCGCCGGAC CCATCGGCAT CATGGCGGTG
GCGATCGCGA AACACGTCGG CGCGCGCAAT GTCGTGATTA CCGACGTCAA CGACTATCGC
CTCGAACTCG CGCGCAAAAT GGGCGCGACG CGCGCGGTCA ATGTCTCGCG CGAATCGTTG
CGCGACGTGA TGGCGGACCT GCACATGACC GAAGGTTTCG ACGTTGGGCT GGAAATGTCA
GGCGTGCCGA GCGCCTTTAC TAGCATGCTC GAAGCGATGA ACCACGGCGG CAAGATTGCG
CTGCTCGGCA TTCCGCCCGC GCAGACGGCG ATCGACTGGA CCCAGGTGAT CTTTAAAGGC
CTCGAAATCA AGGGCATTTA TGGGCGCGAG ATGTTCGAGA CCTGGTACAA GATGGTTGCG
ATGCTGCAAA GCGGTCTGGA TCTCTCACCG ATCCTCACGC ACCATTTCAA GGTCGACGAT
TATCAGGAAG CGTTCGCCAC AATGCTCTCC GGCGAGAGCG GCAAGGTCAT TCTCGACTGG
ACAGCCGCGT GA
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| Protein sequence | MKALAKLERA PGLTLTDVKK PEVGHNDVMI RITRTAICGT DIHIWKWDDW AQKTIPVPMH
VGHEYVGEIV EMGQEVRGFA IGDRVSGEGH ITCGFCRNCR AGRRHLCRNT VGVGVNREGA
FAEYLVIPAF NAFKIPPEIS DDLAAIFDPF GNATHTALSF NLVGEDVLIT GAGPIGIMAV
AIAKHVGARN VVITDVNDYR LELARKMGAT RAVNVSRESL RDVMADLHMT EGFDVGLEMS
GVPSAFTSML EAMNHGGKIA LLGIPPAQTA IDWTQVIFKG LEIKGIYGRE MFETWYKMVA
MLQSGLDLSP ILTHHFKVDD YQEAFATMLS GESGKVILDW TAA
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