Gene Bphyt_7002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7002 
Symbol 
ID6280074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3380055 
End bp3380705 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID642618025 
ProductYceI family protein 
Protein accessionYP_001890661 
Protein GI187921629 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC TGACTCTTCG CGCCACGATC GCGCGCGCCA TGCTCAGCGC AACGCTACTG 
ACGGCGATGG CCTGCACGCC TGTGCAGGTG CTTACGCATA CGGTCAGCCA GAACGAGACG
CGCGTGCCGC CTGGCCGCTA CGAAATCGAT CCGGATCACT GCAGCATTAC CTTCGACATC
GATCACTTCA AGTATTCACG CTTCACGGCG CGCTTCGATC GCAAGAAGGG GGAACTCGAC
TGGAACGAAG GCGGCCTGGA CAAGAGCACG ACGTCGGTGA CGATCGACGC CGCGAGCATC
GATACGAATG TGCCGTTGCT GGACAAGATG GTGAAGAGCG GCAACATGCT CGACGTGGAG
CGCTATCCGG AGATTCGCTT CGTCAGCACG CGTTTTGAAC GCACCGGTGA ATCGCGCGGC
ACGTTGACTG GCGATCTGAC CATTCGCGGC GTCACGCAGC CGGTCATGCT CGACGTCACT
TTCAACGGTT TTGCCCCCGA TCCGCTCACG AAAAAAGACA CGCTCGGCTT TTCCGCCGAG
GGCCATTTCA GTCGCGCGAA GTTTGGTTTG GCGACGTGGT ATCCGGCCGT TGGTGATGAT
ATTCATGTGC GCATTCAGGC CGAGTTCGTT AAAACGCCCG CAGGCGGGTG A
 
Protein sequence
MSTLTLRATI ARAMLSATLL TAMACTPVQV LTHTVSQNET RVPPGRYEID PDHCSITFDI 
DHFKYSRFTA RFDRKKGELD WNEGGLDKST TSVTIDAASI DTNVPLLDKM VKSGNMLDVE
RYPEIRFVST RFERTGESRG TLTGDLTIRG VTQPVMLDVT FNGFAPDPLT KKDTLGFSAE
GHFSRAKFGL ATWYPAVGDD IHVRIQAEFV KTPAGG