Gene Bphyt_7000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7000 
Symbol 
ID6279915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3378788 
End bp3379267 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content61% 
IMG OID642618023 
Productprotein of unknown function DUF1348 
Protein accessionYP_001890659 
Protein GI187921627 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CAATTGAAAC CCGCCCGCCG CTGCCGCCCT TCACACGCGA AACCGCGATC 
CAGAAAGTGC GTGCCGCCGA AGACGGCTGG AATACCCGCG ACCCCGAGCG CGTGTCGCTC
GCCTACACCG TCGATAGCGT CTGGCGCAAT CGCGCCGAAT TCACGAAGGG TCGCGCGGAG
ATTGTCGGCT TGTTGCGCCG TAAATGGGCG AGAGAACTCG ATTACCGTTT GATCAAGGAA
CTGTGGGCGT TCACCGATAA CCGCATCGCC GTGCGTTTTG CCTATGAATG GCACGACGAT
TCGAACAACT GGTTCCGCTC GTACGGCAAC GAGAACTGGG AATTCGACGA GCACGGGCTG
ATGGCGCACC GTCACGCAAG CATCAACGAT ATGCCGATCC GCGAAGCCGA CCGTCTCTAT
CACTGGCCGC TCGGCCGCCG CCCCGACGAC CATCCGAGCC TGTCCGATCT CGGTCTTTGA
 
Protein sequence
MADTIETRPP LPPFTRETAI QKVRAAEDGW NTRDPERVSL AYTVDSVWRN RAEFTKGRAE 
IVGLLRRKWA RELDYRLIKE LWAFTDNRIA VRFAYEWHDD SNNWFRSYGN ENWEFDEHGL
MAHRHASIND MPIREADRLY HWPLGRRPDD HPSLSDLGL