Gene Bphyt_6994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6994 
Symbol 
ID6279958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3374532 
End bp3375779 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID642618017 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001890653 
Protein GI187921621 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CCTTTAACAC ACTGTTTGGC CGGCTCTCGT TGATGACGGT GAGCCTGATC 
GTGCTGGTGC ACATCACCGC CCTGCTGCTC GTGGACCGTG AGCGCGGGCA GATCGATACG
GGGCACGCGC GGCAGGCGCT GCTTCTGGCG GTGCAGGCCG AACACGACGG CGCACTGGCC
GCGTCGCACG TTTCGGCGAT ACTCGGCGTG TCGTATGTCA AGGCGGGCGA TGTGATCGCG
GCGGGCTGTC CCGCGCCATG TGAGAACACG TCGGGTCCAT TCGAACGCGA CCTGCGCGCG
AAGTTGCCGA CCGGCAGCCA GGTGGTGGCC GACGCCGATG ACGGCACGGT GTGGGTGCAT
TACGCGGGCT ACCCGGACTG GCTCAAACTG CGGAATTCGA TGCTGCCCGC ACGGCGCTTT
CTCGGCGCAT CGGCAACGAT GCTAGTGCTC GCCGTGATCA TCGCGTTGGT TGGCGCTTGG
CATTTGCAGC GGCCCTTACA TCGGCTCGCG CTTGCGGCAC GCGAATTCCG CATCGACCAT
CGCGCGCCGG TCGTCGAGGC GAGCGGTCCG CGCGAGTTGA AGGAATTGAT CGGCGACTTC
AACCAGATGG TGCATGAGCT CGCGCAGGCC GGCCAGGAAC GCGCGGTGAT GCTCGCTGGC
GTGGCGCACG ATTTGCGCGC GCCGATTACG CGCATGCAGG TGCGCGCCGA TCTGCTGCCC
GACGAAGCGA ACCGTCGCGG CTTTTTGCGC GATGCGGAGT CGTTGTCGCG CATCGTCACG
CAGTTTCTGG ATTTTGCGCG CGAGACCGCG GACTCCTCGC CGCGTACCAA TGTCGACGCG
CATTGCCGCC GTCATTACGG CGACAGTCTC GCCGACGATG CACTCGTGCG TCTGAATCTG
CATGCCGGCG ACGGGTTCGA GTTGCCGCTC GTCGACCTCG ACCGGATTCT GACGAACCTG
ATCGAGAACG CGCTCACGTA TGGCGAACCG GCGGTGGAAA TCTCGACGTC GCGGCATAAC
GGCCGCTTTA CGCTCGAGGT GCGCGATCAC GGCGGCGGCA TTCCCGGCGG TCAGCTCGAC
CGCGCGCTGC AGCCCTTTGT GCGGCTCGAC GAAGCACGCA GCGGCGATGC GCATTGTGGC
TTGGGCCTTG CGATCGTTCG TCGTCTGGTG CGCTATAACA GCGGCGCTTT TCATGCGGAT
AATGCGGCCG ACGGCGGGTT CGTGGTGTCG ATGACGTTTC CGGCATAG
 
Protein sequence
MTNPFNTLFG RLSLMTVSLI VLVHITALLL VDRERGQIDT GHARQALLLA VQAEHDGALA 
ASHVSAILGV SYVKAGDVIA AGCPAPCENT SGPFERDLRA KLPTGSQVVA DADDGTVWVH
YAGYPDWLKL RNSMLPARRF LGASATMLVL AVIIALVGAW HLQRPLHRLA LAAREFRIDH
RAPVVEASGP RELKELIGDF NQMVHELAQA GQERAVMLAG VAHDLRAPIT RMQVRADLLP
DEANRRGFLR DAESLSRIVT QFLDFARETA DSSPRTNVDA HCRRHYGDSL ADDALVRLNL
HAGDGFELPL VDLDRILTNL IENALTYGEP AVEISTSRHN GRFTLEVRDH GGGIPGGQLD
RALQPFVRLD EARSGDAHCG LGLAIVRRLV RYNSGAFHAD NAADGGFVVS MTFPA